Confronting complexity: real-world immunodominance in antiviral CD8+ T cell responses

JW Yewdell - Immunity, 2006 - cell.com
Antiviral CD8+ T cells respond to only a minute fraction of the potential peptide determinants
encoded by viral genomes. Immunogenic determinants can be ordered into highly …

Autophagy proteins in antigen processing for presentation on MHC molecules

C Münz - Immunological reviews, 2016 - Wiley Online Library
Autophagy describes catabolic pathways that deliver cytoplasmic constituents for lysosomal
degradation. Since major histocompatibility complex (MHC) molecules sample protein …

Mass spectrometry–based identification of MHC-bound peptides for immunopeptidomics

AW Purcell, SH Ramarathinam, N Ternette - Nature protocols, 2019 - nature.com
Peptide antigens bound to molecules encoded by the major histocompatibility complex
(MHC) and presented on the cell surface form the targets of T lymphocytes. This critical arm …

Translation from the 5′ untranslated region shapes the integrated stress response

SR Starck, JC Tsai, K Chen, M Shodiya, L Wang… - Science, 2016 - science.org
INTRODUCTION Protein synthesis is controlled by a plethora of developmental and
environmental conditions. One intracellular signaling network, the integrated stress …

Subfemtomole MS and MS/MS peptide sequence analysis using nano-HPLC micro-ESI fourier transform ion cyclotron resonance mass spectrometry

SE Martin, J Shabanowitz, DF Hunt… - Analytical …, 2000 - ACS Publications
Subfemtomole peptide sequence analysis has been achieved using microcapillary HPLC
columns, with integrated nanoelectrospray emitters, coupled directly to a Fourier transform …

Kinetics of antigen expression and epitope presentation during virus infection

NP Croft, SA Smith, YC Wong, CT Tan… - PLoS …, 2013 - journals.plos.org
Current knowledge about the dynamics of antigen presentation to T cells during viral
infection is very poor despite being of fundamental importance to our understanding of anti …

Endoplasmic reticulum aminopeptidase 1 (ERAP1) trims MHC class I-presented peptides in vivo and plays an important role in immunodominance

IA York, MA Brehm, S Zendzian… - Proceedings of the …, 2006 - National Acad Sciences
CD8+ T cells respond to short peptides bound to MHC class I molecules. Although most
antigenic proteins contain many sequences that could bind to MHC class I, few of these …

A quantitative analysis of the variables affecting the repertoire of T cell specificities recognized after vaccinia virus infection

E Assarsson, J Sidney, C Oseroff… - The Journal of …, 2007 - journals.aai.org
Many components contribute to immunodominance in the response to a complex virus, but
their relative importance is unclear. This was addressed using vaccinia virus and HLA-A …

[图书][B] HPLC of Peptides and Proteins

MI Aguilar - 2004 - Springer
High-performance liquid chromatography (HPLC) is now firmly established as the premier
technique for the analysis and purification of a wide range of molecules. In particular, HPLC …

Optimization of epitope processing enhances immunogenicity of multiepitope DNA vaccines

BD Livingston, M Newman, C Crimi, D McKinney… - Vaccine, 2001 - Elsevier
Experimental DNA vaccines comprised of multiple minimal cytotoxic T lymphocytes (CTL)
epitopes can effectively induce broad CTL responses; however, such constructs frequently …