Simulation of chemical reaction equilibria by the reaction ensemble Monte Carlo method: a review

C Heath Turner, JK Brennan, M Lisal… - Molecular …, 2008 - Taylor & Francis
Understanding and predicting the equilibrium behaviour of chemically reacting systems in
highly non-ideal environments is critical to many fields of science and technology, including …

On the inner workings of Monte Carlo codes

D Dubbeldam, A Torres-Knoop, KS Walton - Molecular Simulation, 2013 - Taylor & Francis
We review state-of-the-art Monte Carlo (MC) techniques for computing fluid coexistence
properties (Gibbs simulations) and adsorption simulations in nanoporous materials such as …

Molecular simulation of aqueous electrolyte solubility. 2. Osmotic ensemble Monte Carlo methodology for free energy and solubility calculations and application to …

F Moucka, M Lísal, J Skvor, J Jirsák… - The Journal of …, 2011 - ACS Publications
We present a new and computationally efficient methodology using osmotic ensemble
Monte Carlo (OEMC) simulation to calculate chemical potential–concentration curves and …

Gas solubility in hydrophobic confinement

A Luzar, D Bratko - The Journal of Physical Chemistry B, 2005 - ACS Publications
Measured forces between apolar surfaces in water have often been found to be sensitive to
exposure to atmospheric gases despite low gas solubilities in bulk water. This raises …

Accurate vapour–liquid equilibrium calculations for complex systems using the reaction Gibbs ensemble Monte Carlo simulation method

M Lísal, WR Smith, I Nezbeda - Fluid Phase Equilibria, 2001 - Elsevier
The reaction Gibbs ensemble Monte Carlo (RGEMC) computer simulation method [J. Phys.
Chem. B 103 (1999) 10496] is used to predict the vapour–liquid equilibrium (VLE) behaviour …

Attractive surface force in the presence of dissolved gas: A molecular approach

D Bratko, A Luzar - Langmuir, 2008 - ACS Publications
Despite widespread evidence of the influence of dissolved air on hydrophobic interaction,
the mechanisms of observed effects are still unknown. Although some experiments indicate …

Multi-scale molecular modeling of chemical reactivity

EE Santiso, KE Gubbins - Molecular Simulation, 2004 - Taylor & Francis
We present a review of the most widely used methods to model chemical reactions, at both
the electronic and atomistic levels. While, in principle, ab initio methods alone should …

Mesoscale simulation of polymer reaction equilibrium: Combining dissipative particle dynamics with reaction ensemble Monte Carlo. I. Polydispersed polymer systems

M Lísal, JK Brennan, WR Smith - The Journal of chemical physics, 2006 - pubs.aip.org
We present a mesoscale simulation technique, called the reaction ensemble dissipative
particle dynamics (RxDPD) method, for studying reaction equilibrium of polymer systems …

Reaction ensemble Monte Carlo simulation of complex molecular systems

TW Rosch, EJ Maginn - Journal of Chemical Theory and …, 2011 - ACS Publications
Acceptance rules for reaction ensemble Monte Carlo (RxMC) simulations containing
classically modeled atomistic degrees of freedom are derived for complex molecular …

Effect of confinement by porous materials on chemical reaction kinetics

CH Turner, JK Brennan, JK Johnson… - The Journal of chemical …, 2002 - pubs.aip.org
A methodology for including the effects of nonidealities, such as confinement in a porous
solid or solvation, into the calculation of bimolecular reaction rate constants is presented …