Development of a hybrid model for a partially known intracellular signaling pathway through correction term estimation and neural network modeling

D Lee, A Jayaraman, JS Kwon - PLoS Computational Biology, 2020 - journals.plos.org
Developing an accurate first-principle model is an important step in employing systems
biology approaches to analyze an intracellular signaling pathway. However, an accurate first …

Stability and stabilization in probability of probabilistic Boolean networks

C Huang, J Lu, G Zhai, J Cao, G Lu… - IEEE Transactions on …, 2020 - ieeexplore.ieee.org
This article studies the stability in probability of probabilistic Boolean networks and
stabilization in the probability of probabilistic Boolean control networks. To simulate more …

Identification of models of heterogeneous cell populations from population snapshot data

J Hasenauer, S Waldherr, M Doszczak, N Radde… - BMC …, 2011 - Springer
Background Most of the modeling performed in the area of systems biology aims at
achieving a quantitative description of the intracellular pathways within a" typical cell" …

Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems

B Ballnus, S Hug, K Hatz, L Görlitz, J Hasenauer… - BMC systems …, 2017 - Springer
Background In quantitative biology, mathematical models are used to describe and analyze
biological processes. The parameters of these models are usually unknown and need to be …

[图书][B] Computational systems biology: From molecular mechanisms to disease

A Kriete, R Eils - 2013 - books.google.com
This comprehensively revised second edition of Computational Systems Biology discusses
the experimental and theoretical foundations of the function of biological systems at the …

An input-to-state stability approach to inertial frequency response analysis of doubly-fed induction generator-based wind turbines

M Toulabi, S Bahrami… - IEEE Transactions on …, 2017 - ieeexplore.ieee.org
Due to the proliferation of wind turbines in power networks, participation of doubly-fed
induction generator (DFIG)-based wind turbines in the frequency regulation task is attracting …

Methods for qualitative analysis of genetic networks

M Chaves - 2009 European Control Conference (ECC), 2009 - ieeexplore.ieee.org
The diagram of interactions of a genetic regulatory network is represented in a natural and
intuitive way by Boolean or other discrete models. Based largely on the structure of the …

Characterizations of input-to-state stability for systems with multiple invariant sets

D Angeli, D Efimov - IEEE Transactions on Automatic Control, 2015 - ieeexplore.ieee.org
We generalize the theory of Input-to-State Stability (ISS) and of its characterizations by
means of Lyapunov dissipation inequalities to the study of systems admitting invariant sets …

Quantitative short‐term voltage stability analysis of power systems integrated with DFIG‐based wind farms

B Qin, H Li, X Zhang, T Ding, K Ma… - IET Generation …, 2020 - Wiley Online Library
With the growing penetration of doubly‐fed induction generator (DFIG)‐based wind farms
(WFs) in power systems, short‐term voltage stability problem has become more prominent …

Nonlinear system identification with prior knowledge on the region of attraction

M Khosravi, RS Smith - IEEE Control Systems Letters, 2020 - ieeexplore.ieee.org
We consider the problem of nonlinear system identification when prior knowledge is
available on the region of attraction (ROA) of an equilibrium point. We propose an …