Natural‐product sugar biosynthesis and enzymatic glycodiversification

CJ Thibodeaux, CE Melançon III… - Angewandte Chemie …, 2008 - Wiley Online Library
Many biologically active small‐molecule natural products produced by microorganisms
derive their activities from sugar substituents. Changing the structures of these sugars can …

Biotechnological advances in UDP-sugar based glycosylation of small molecules

F De Bruyn, J Maertens, J Beauprez, W Soetaert… - Biotechnology …, 2015 - Elsevier
Glycosylation of small molecules like specialized (secondary) metabolites has a profound
impact on their solubility, stability or bioactivity, making glycosides attractive compounds as …

Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry

H Zhang, X Li, DB Martin, R Aebersold - Nature biotechnology, 2003 - nature.com
Quantitative proteome profiling using stable isotope protein tagging and automated tandem
mass spectrometry (MS/MS) is an emerging technology with great potential for the functional …

Label-free measuring and mapping of binding kinetics of membrane proteins in single living cells

W Wang, Y Yang, S Wang, VJ Nagaraj, Q Liu, J Wu… - Nature …, 2012 - nature.com
Membrane proteins mediate a variety of cellular responses to extracellular signals. Although
membrane proteins are studied intensively for their values as disease biomarkers and …

Solid-phase extraction of N-linked glycopeptides

Y Tian, Y Zhou, S Elliott, R Aebersold, H Zhang - Nature protocols, 2007 - nature.com
Protein glycosylation is a common post-translational modification and has been increasingly
recognized as one of the most prominent biochemical alterations associated with malignant …

GPQuest: a spectral library matching algorithm for site-specific assignment of tandem mass spectra to intact N-glycopeptides

S Toghi Eshghi, P Shah, W Yang, X Li… - Analytical …, 2015 - ACS Publications
Glycoprotein changes occur in not only protein abundance but also the occupancy of each
glycosylation site by different glycoforms during biological or pathological processes. Recent …

Quantification in proteomics through stable isotope coding: a review

S Julka, F Regnier - Journal of proteome research, 2004 - ACS Publications
This review focuses on techniques for quantification and identification in proteomics by
stable isotope coding. Methods are examined for analyzing expression, post-translational …

Sugar profiling proves that human serum erythropoietin differs from recombinant human erythropoietin

V Skibeli, G Nissen-Lie… - Blood, The Journal of the …, 2001 - ashpublications.org
Erythropoietin (EPO) from sera obtained from anemic patients was successfully isolated
using magnetic beads coated with a human EPO (hEPO)–specific antibody. Human serum …

Sample preparation for serum/plasma profiling and biomarker identification by mass spectrometry

JL Luque-Garcia, TA Neubert - Journal of Chromatography A, 2007 - Elsevier
In this article, we present an overview of the different strategies for sample preparation for
identification by mass spectrometry (MS) of biomarkers from serum and/or plasma. We …

Comparative serum glycoproteomics using lectin selected sialic acid glycoproteins with mass spectrometric analysis: application to pancreatic cancer serum

J Zhao, DM Simeone, D Heidt… - Journal of proteome …, 2006 - ACS Publications
A strategy is developed in this study for identifying sialylated glycoprotein markers in human
cancer serum. This method consists of three steps: lectin affinity selection, a liquid …