Plassembler: an automated bacterial plasmid assembly tool

G Bouras, AE Sheppard, V Mallawaarachchi… - …, 2023 - academic.oup.com
With recent advances in sequencing technologies, it is now possible to obtain near-perfect
complete bacterial chromosome assemblies cheaply and efficiently by combining a long …

Dnaapler: a tool to reorient circular microbial genomes

G Bouras, SR Grigson… - Journal of Open …, 2024 - researchnow.flinders.edu.au
Microorganisms found in natural environments are fundamental components of ecosystems
and play vital roles in various ecological processes. Studying their genomes can provide …

Hybracter: enabling scalable, automated, complete and accurate bacterial genome assemblies

G Bouras, G Houtak, RR Wick… - Microbial …, 2024 - microbiologyresearch.org
Improvements in the accuracy and availability of long-read sequencing mean that complete
bacterial genomes are now routinely reconstructed using hybrid (ie short-and long-reads) …