Tools for genetic studies in experimental populations of polyploids

PM Bourke, RE Voorrips, RGF Visser… - Frontiers in plant …, 2018 - frontiersin.org
Polyploid organisms carry more than two copies of each chromosome, a condition rarely
tolerated in animals but which occurs relatively frequently in the plant kingdom. One of the …

Understanding starch biosynthesis in potatoes for metabolic engineering to improve starch quality: A detailed review

D Ahmad, Y Ying, J Bao - Carbohydrate Polymers, 2024 - Elsevier
Potato tubers accumulate substantial quantities of starch, which serves as their primary
energy reserve. As the predominant component of potato tubers, starch strongly influences …

Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning …

G Hoopes, X Meng, JP Hamilton, SR Achakkagari… - Molecular plant, 2022 - cell.com
Cultivated potato is a clonally propagated autotetraploid species with a highly
heterogeneous genome. Phased assemblies of six cultivars including two chromosome …

Genetic variance partitioning and genome-wide prediction with allele dosage information in autotetraploid potato

JB Endelman, CAS Carley, PC Bethke, JJ Coombs… - Genetics, 2018 - academic.oup.com
As one of the world's most important food crops, the potato (Solanum tuberosum L.) has
spurred innovation in autotetraploid genetics, including in the use of SNP arrays to …

Achievements and challenges of genomics-assisted breeding in forest trees: From marker-assisted selection to genome editing

S Ahmar, P Ballesta, M Ali, F Mora-Poblete - International Journal of …, 2021 - mdpi.com
Forest tree breeding efforts have focused mainly on improving traits of economic importance,
selecting trees suited to new environments or generating trees that are more resilient to …

Solyntus, the New Highly Contiguous Reference Genome for Potato (Solanum tuberosum)

N van Lieshout, A van der Burgt… - G3: Genes …, 2020 - academic.oup.com
With the rapid expansion of the application of genomics and sequencing in plant breeding,
there is a constant drive for better reference genomes. In potato (Solanum tuberosum), the …

Genomic selection in plant breeding: Key factors shaping two decades of progress

A Alemu, J Åstrand, OA Montesinos-Lopez… - Molecular Plant, 2024 - cell.com
Genomic selection, the application of genomic prediction (GP) models to select candidate
individuals, has significantly advanced in the past two decades, effectively accelerating …

Exploring the optimization of water and fertilizer management practices for potato production in the sandy loam soils of Northwest China based on PCA

X Wang, T Guo, Y Wang, Y Xing, Y Wang… - Agricultural Water …, 2020 - Elsevier
Reasonable water and fertilizer management technology can improve water use efficiency
(WUE), fertilizer use efficiency, potato (Solanum tuberosum L.) tuber yield and quality, but …

Genomic variation predicts adaptive evolutionary responses better than population bottleneck history

M Ørsted, AA Hoffmann, E Sverrisdóttir… - PLoS …, 2019 - journals.plos.org
The relationship between population size, inbreeding, loss of genetic variation and
evolutionary potential of fitness traits is still unresolved, and large-scale empirical studies …

Genomic Selection for Late Blight and Common Scab Resistance in Tetraploid Potato (Solanum tuberosum)

F Enciso-Rodriguez, D Douches… - G3: Genes …, 2018 - academic.oup.com
Potato (Solanum tuberosum) is a staple food crop and is considered one of the main
sources of carbohydrates worldwide. Late blight (Phytophthora infestans) and common scab …