[HTML][HTML] GenArchBench: A genomics benchmark suite for arm HPC processors
L López-Villellas, R Langarita-Benítez… - Future Generation …, 2024 - Elsevier
Arm usage has substantially grown in the High-Performance Computing (HPC) community.
Japanese supercomputer Fugaku, powered by Arm-based A64FX processors, held the top …
Japanese supercomputer Fugaku, powered by Arm-based A64FX processors, held the top …
Genome-wide identification analysis in wild-type Solanum pinnatisectum reveals some genes defending against Phytophthora infestans
C Shen, Q Lu, D Yang, X Zhang, X Huang, R Li… - Frontiers in …, 2024 - frontiersin.org
Solanum pinnatisectum exhibits strong resistance to late blight caused by Phytophthora
infestans but only an incomplete genome assembly based on short Illumina reads has been …
infestans but only an incomplete genome assembly based on short Illumina reads has been …
BinDash 2.0: new MinHash scheme allows ultra-fast and accurate genome search and comparisons
J Zhao, XF Zhao, J Pierre-Both, KT Konstantinidis - bioRxiv, 2024 - biorxiv.org
Motivation: Comparing large number of genomes in term of their genomic distance is
becoming more and more challenging because there is an increasing number of microbial …
becoming more and more challenging because there is an increasing number of microbial …
A Further Study of Linux Kernel Hugepages on A64FX with FLASH, an Astrophysical Simulation Code
We present an expanded study of the performance of FLASH when using Linux Kernel
Hugepages on Ookami, an HPE Apollo 80 A64FX platform. FLASH is a multi-scale, multi …
Hugepages on Ookami, an HPE Apollo 80 A64FX platform. FLASH is a multi-scale, multi …
Performance Models for Sequence Alignment Algorithms Based on Burrows-Wheeler Transform
S Hu, C Chen - Proceedings of the 2024 16th International Conference …, 2024 - dl.acm.org
Sequence alignment algorithms based on Burrows-Wheeler Transform are among
mainstream algorithms for mapping short reads, produced by second generation …
mainstream algorithms for mapping short reads, produced by second generation …