Next-generation sequencing: insights to advance clinical investigations of the microbiome

CR Wensel, JL Pluznick, SL Salzberg… - The Journal of clinical …, 2022 - Am Soc Clin Investig
Next-generation sequencing (NGS) technology has advanced our understanding of the
human microbiome by allowing for the discovery and characterization of unculturable …

Quantifying bias introduced by sample collection in relative and absolute microbiome measurements

DG Maghini, M Dvorak, A Dahlen, M Roos… - Nature …, 2024 - nature.com
To gain insight into the accuracy of microbial measurements, it is important to evaluate
sources of bias related to sample condition, preservative method and bioinformatic …

[HTML][HTML] The emerging potential of microbiome transplantation on human health interventions

H Junca, DH Pieper, E Medina - Computational and structural …, 2022 - Elsevier
The human microbiome has been the subject of intense research over the past few decades,
in particular as a promising area for new clinical interventions. The microbiota colonizing the …

Guidelines for microbiome studies in renal physiology

RR Muralitharan, M Snelson, G Meric… - American Journal …, 2023 - journals.physiology.org
Gut microbiome research has increased dramatically in the last decade, including in renal
health and disease. The field is moving from experiments showing mere association to …

[HTML][HTML] Characterisation of chemical, microbial and sensory profiles of commercial kombuchas

M Andreson, J Kazantseva, R Kuldjärv, E Malv… - International Journal of …, 2022 - Elsevier
The kombucha market is a fast-growing segment in the functional beverage category. The
selection of kombuchas on the market varies between the traditional and flavoured …

Catalyzing oxygen reduction by morphologically engineered ZIF-derived carbon composite catalysts in dual-chamber microbial fuel cells

R Kumar, M Mooste, Z Ahmed, I Zekker… - Journal of …, 2024 - Elsevier
From the past decades, microbial fuel cells (MFCs) have evolved as a green alternative to
produce electrical energy from organic matter degradation. Cathode modification …

Benchmarking DNA isolation methods for marine metagenomics

A Demkina, D Slonova, V Mamontov, O Konovalova… - Scientific reports, 2023 - nature.com
Metagenomics is a powerful tool to study marine microbial communities. However, obtaining
high-quality environmental DNA suitable for downstream sequencing applications is a …

Association of Gut Lachnospiraceae and Chronic Spontaneous Urticaria

D Ćesić, L Lugović Mihić, P Ozretić, I Lojkić, M Buljan… - Life, 2023 - mdpi.com
(1) Background: Chronic spontaneous urticaria (CSU) has been linked to the dysbiosis of
the gut microbiota. Furthermore, various studies have highlighted the anti-inflammatory …

[HTML][HTML] Microbiological, chemical, and sensorial characterisation of commercially available plant-based yoghurt alternatives

N Part, J Kazantseva, S Rosenvald, A Kallastu… - Future Foods, 2023 - Elsevier
Consumer demand for plant-based dairy alternatives has increased rapidly during the past
few years and the market has been saturated with a wide variety of alternative products. The …

Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome

D Salamon, B Zapała, A Krawczyk… - Applied Microbiology …, 2022 - Springer
Amplicon-based next-generation sequencing (NGS) of the 16S ribosomal RNA (16S)
regions is a culture-free method used to identify and analyze Procaryota occurring within a …