Quantitative genetics and genomics converge to accelerate forest tree breeding

D Grattapaglia, OB Silva-Junior, RT Resende… - Frontiers in plant …, 2018 - frontiersin.org
Forest tree breeding has been successful at delivering genetically improved material for
multiple traits based on recurrent cycles of selection, mating, and testing. However, long …

Genomic selection for forest tree improvement: Methods, achievements and perspectives

VG Lebedev, TN Lebedeva, AI Chernodubov… - Forests, 2020 - mdpi.com
The breeding of forest trees is only a few decades old, and is a much more complicated,
longer, and expensive endeavor than the breeding of agricultural crops. One breeding cycle …

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

DB Neale, JL Wegrzyn, KA Stevens, AV Zimin, D Puiu… - Genome biology, 2014 - Springer
Background The size and complexity of conifer genomes has, until now, prevented full
genome sequencing and assembly. The large research community and economic …

Twelve years into genomic selection in forest trees: climbing the slope of enlightenment of marker assisted tree breeding

D Grattapaglia - Forests, 2022 - mdpi.com
Twelve years have passed since the early outlooks of applying genomic selection (GS) to
forest tree breeding, initially based on deterministic simulations, soon followed by empirical …

Genomic selection in forest tree breeding: the concept and an outlook to the future

F Isik - New Forests, 2014 - Springer
Using large numbers of DNA markers to predict genetic merit [genomic selection (GS)] is a
new frontier in plant and animal breeding programs. GS is now routinely used to select …

Accuracy of genomic selection models in a large population of open-pollinated families in white spruce

J Beaulieu, T Doerksen, S Clément, J MacKay… - Heredity, 2014 - nature.com
Genomic selection (GS) is of interest in breeding because of its potential for predicting the
genetic value of individuals and increasing genetic gains per unit of time. To date, very few …

Factors affecting the accuracy of genomic selection for growth and wood quality traits in an advanced-breeding population of black spruce (Picea mariana)

PRN Lenz, J Beaulieu, SD Mansfield, S Clément… - BMC genomics, 2017 - Springer
Background Genomic selection (GS) uses information from genomic signatures consisting of
thousands of genetic markers to predict complex traits. As such, GS represents a promising …

Genomic selection in maritime pine

F Isik, J Bartholomé, A Farjat, E Chancerel, A Raffin… - Plant Science, 2016 - Elsevier
A two-generation maritime pine (Pinus pinaster Ait.) breeding population (n= 661) was
genotyped using 2500 SNP markers. The extent of linkage disequilibrium and utility of …

Genomics-assisted breeding in fruit trees

H Iwata, MF Minamikawa, H Kajiya-Kanegae… - Breeding …, 2016 - jstage.jst.go.jp
Recent advancements in genomic analysis technologies have opened up new avenues to
promote the efficiency of plant breeding. Novel genomics-based approaches for plant …

Accuracy of genomic selection for growth and wood quality traits in two control-pollinated progeny trials using exome capture as the genotyping platform in Norway …

ZQ Chen, J Baison, J Pan, B Karlsson, B Andersson… - BMC genomics, 2018 - Springer
Background Genomic selection (GS) can increase genetic gain by reducing the length of
breeding cycle in forest trees. Here we genotyped 1370 control-pollinated progeny trees …