Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data
Liquid chromatography coupled with high-resolution mass spectrometry (LC–HRMS) has
become a workhorse in global metabolomics studies with growing applications across …
become a workhorse in global metabolomics studies with growing applications across …
Towards a harmonized identification scoring system in LC-HRMS/MS based non-target screening (NTS) of emerging contaminants
N Alygizakis, F Lestremau, P Gago-Ferrero… - TrAC Trends in …, 2023 - Elsevier
Non-target screening (NTS) methods are rapidly gaining in popularity, empowering
researchers to search for an ever-increasing number of chemicals. Given this possibility …
researchers to search for an ever-increasing number of chemicals. Given this possibility …
MetaboAnalyst 5.0: narrowing the gap between raw spectra and functional insights
Since its first release over a decade ago, the MetaboAnalyst web-based platform has
become widely used for comprehensive metabolomics data analysis and interpretation …
become widely used for comprehensive metabolomics data analysis and interpretation …
Feature-based molecular networking in the GNPS analysis environment
Molecular networking has become a key method to visualize and annotate the chemical
space in non-targeted mass spectrometry data. We present feature-based molecular …
space in non-targeted mass spectrometry data. We present feature-based molecular …
MetaboAnalystR 3.0: toward an optimized workflow for global metabolomics
Liquid chromatography coupled to high-resolution mass spectrometry platforms are
increasingly employed to comprehensively measure metabolome changes in systems …
increasingly employed to comprehensively measure metabolome changes in systems …
Comparison of full-scan, data-dependent, and data-independent acquisition modes in liquid chromatography–mass spectrometry based untargeted metabolomics
Full-scan, data-dependent acquisition (DDA), and data-independent acquisition (DIA) are
the three common data acquisition modes in high resolution mass spectrometry-based …
the three common data acquisition modes in high resolution mass spectrometry-based …
Cross sectional evaluation of the gut-microbiome metabolome axis in an Italian cohort of IBD patients
Inflammatory bowel disease (IBD) is a chronic inflammatory disease of the gastrointestinal
tract of uncertain origin, which includes ulcerative colitis (UC) and Crohn's disease (CD) …
tract of uncertain origin, which includes ulcerative colitis (UC) and Crohn's disease (CD) …
Change in the chemical content of untreated wastewater of Athens, Greece under COVID-19 pandemic
COVID-19 pandemic spread rapidly worldwide with unanticipated effects on mental health,
lifestyle, stability of economies and societies. Although many research groups have already …
lifestyle, stability of economies and societies. Although many research groups have already …
[HTML][HTML] An assessment of quality assurance/quality control efforts in high resolution mass spectrometry non-target workflows for analysis of environmental samples
B Schulze, Y Jeon, S Kaserzon, AL Heffernan… - TrAC Trends in …, 2020 - Elsevier
The application of non-target analysis (NTA), a comprehensive approach to characterize
unknown chemicals, including chemicals of emerging concern has seen a steady increase …
unknown chemicals, including chemicals of emerging concern has seen a steady increase …
HEx: A heterologous expression platform for the discovery of fungal natural products
CJB Harvey, M Tang, U Schlecht, J Horecka… - Science …, 2018 - science.org
For decades, fungi have been a source of US Food and Drug Administration–approved
natural products such as penicillin, cyclosporine, and the statins. Recent breakthroughs in …
natural products such as penicillin, cyclosporine, and the statins. Recent breakthroughs in …