Origin and evolution of spliceosomal introns

IB Rogozin, L Carmel, M Csuros, EV Koonin - Biology direct, 2012 - Springer
Evolution of exon-intron structure of eukaryotic genes has been a matter of long-standing,
intensive debate. The introns-early concept, later rebranded 'introns first'held that protein …

[PDF][PDF] Splicing of precursors to mRNAs by the spliceosomes

CB Burge, T Tuschl, PA Sharp - Cold Spring Harbor Monograph Series, 1999 - Citeseer
The splicing of precursors to mRNAs occurs in two steps, both involving single
transesterification reactions (Fig. 1). The first step generates a 2-5 bond at the branch site …

RNA catalyses nuclear pre-mRNA splicing

SM Fica, N Tuttle, T Novak, NS Li, J Lu, P Koodathingal… - Nature, 2013 - nature.com
In nuclear pre-messenger RNA splicing, introns are excised by the spliceosome, a dynamic
machine composed of both proteins and small nuclear RNAs (snRNAs). Over thirty years …

Structure of a pre-catalytic spliceosome

C Plaschka, PC Lin, K Nagai - Nature, 2017 - nature.com
Intron removal requires assembly of the spliceosome on precursor mRNA (pre-mRNA) and
extensive remodelling to form the spliceosome's catalytic centre. Here we report the cryo …

Prespliceosome structure provides insights into spliceosome assembly and regulation

C Plaschka, PC Lin, C Charenton, K Nagai - Nature, 2018 - nature.com
The spliceosome catalyses the excision of introns from pre-mRNA in two steps, branching
and exon ligation, and is assembled from five small nuclear ribonucleoprotein particles …

Structure of a spliceosome remodelled for exon ligation

SM Fica, C Oubridge, WP Galej, ME Wilkinson, XC Bai… - Nature, 2017 - nature.com
The spliceosome excises introns from pre-mRNAs in two sequential transesterifications—
branching and exon ligation—catalysed at a single catalytic metal site in U6 small nuclear …

The structure and function of proteins involved in mammalian pre-mRNA splicing

A Krämer - Annual review of biochemistry, 1996 - annualreviews.org
Intervening sequences are removed from nuclear pre-mRNAs in a well-defined multi-step
pathway. Small nuclear ribonucleoprotein particles (snRNPs) and numerous protein factors …

Prp8 protein: at the heart of the spliceosome

RJ Grainger, JD Beggs - Rna, 2005 - rnajournal.cshlp.org
Pre-messenger RNA (pre-mRNA) splicing is a central step in gene expression. Lying
between transcription and protein synthesis, pre-mRNA splicing removes sequences …

Genome-Wide Analysis of Alternative Splicing in Zea mays: Landscape and Genetic Regulation

SR Thatcher, W Zhou, A Leonard, BB Wang… - The Plant …, 2014 - academic.oup.com
Alternative splicing enhances transcriptome diversity in all eukaryotes and plays a role in
plant tissue identity and stress adaptation. To catalog new maize (Zea mays) transcripts and …

An RNA switch at the 5′ splice site requires ATP and the DEAD box protein Prp28p

JP Staley, C Guthrie - Molecular cell, 1999 - cell.com
Pre-mRNA splicing requires dramatic RNA rearrangements hypothesized to be catalyzed by
ATP-dependent RNA unwindases of the DExD/H box family. In a rearrangement critical for …