The human gastric microbiota: Is it time to rethink the pathogenesis of stomach diseases?

G Nardone, D Compare - United European gastroenterology …, 2015 - journals.sagepub.com
Introduction Although long thought to be a sterile organ, due to its acid production, the
human stomach holds a core microbiome. Aim To provide an update of findings related to …

Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities

UME Schütte, Z Abdo, SJ Bent, C Shyu… - Applied microbiology …, 2008 - Springer
Terminal restriction fragment length polymorphism (T-RFLP) analysis is a popular high-
throughput fingerprinting technique used to monitor changes in the structure and …

Kombucha tea fermentation: Microbial and biochemical dynamics

S Chakravorty, S Bhattacharya, A Chatzinotas… - International journal of …, 2016 - Elsevier
Kombucha tea, a non-alcoholic beverage, is acquiring significant interest due to its claimed
beneficial properties. The microbial community of Kombucha tea consists of bacteria and …

Microbiome and Exudates of the Root and Rhizosphere of Brachypodium distachyon, a Model for Wheat

A Kawasaki, S Donn, PR Ryan, U Mathesius, R Devilla… - PloS one, 2016 - journals.plos.org
The rhizosphere microbiome is regulated by plant genotype, root exudates and
environment. There is substantial interest in breeding and managing crops that host root …

Biological imaging without autofluorescence in the second near-infrared region

S Diao, G Hong, AL Antaris, JL Blackburn, K Cheng… - Nano Research, 2015 - Springer
Fluorescence imaging is capable of acquiring anatomical and functional information with
high spatial and temporal resolution. This imaging technique has been indispensable in …

Root exudate cocktails: the link between plant diversity and soil microorganisms?

K Steinauer, A Chatzinotas… - Ecology and …, 2016 - Wiley Online Library
Higher plant diversity is often associated with higher soil microbial biomass and diversity,
which is assumed to be partly due to elevated root exudate diversity. However, there is little …

Impact of biochar application to soil on the root-associated bacterial community structure of fully developed greenhouse pepper plants

M Kolton, Y Meller Harel, Z Pasternak… - Applied and …, 2011 - Am Soc Microbiol
Adding biochar to soil has environmental and agricultural potential due to its long-term
carbon sequestration capacity and its ability to improve crop productivity. Recent studies …

Microbial community structure and dynamics during anaerobic digestion of various agricultural waste materials

AM Ziganshin, J Liebetrau, J Pröter… - Applied microbiology and …, 2013 - Springer
The influence of the feedstock type on the microbial communities involved in anaerobic
digestion was investigated in laboratory-scale biogas reactors fed with different agricultural …

16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis

Y Wang, JD Hoenig, KJ Malin, S Qamar… - The ISME …, 2009 - academic.oup.com
Neonatal necrotizing enterocolitis (NEC) is an inflammatory intestinal disorder affecting
preterm infants. Intestinal bacteria have an important function; however no causative …

Differences in the composition of vaginal microbial communities found in healthy Caucasian and black women

X Zhou, CJ Brown, Z Abdo, CC Davis… - The ISME …, 2007 - academic.oup.com
The maintenance of a low pH in the vagina through the microbial production of lactic acid is
known to be an important defense against infectious disease in reproductive age women …