From molecules to populations: appreciating and estimating recombination rate variation

JV Peñalba, JBW Wolf - Nature Reviews Genetics, 2020 - nature.com
Recombination is a central biological process with implications for many areas in the life
sciences. Yet we are only beginning to appreciate variation in the recombination rate along …

[HTML][HTML] Current status and trends in forest genomics

D Borthakur, V Busov, XH Cao, Q Du, O Gailing… - Forestry …, 2022 - maxapress.com
Forests are not only the most predominant of the Earth's terrestrial ecosystems, but are also
the core supply for essential products for human use. However, global climate change and …

A beginner's guide to low‐coverage whole genome sequencing for population genomics

RN Lou, A Jacobs, AP Wilder… - Molecular …, 2021 - Wiley Online Library
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …

The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars

J Salojärvi, A Rambani, Z Yu, R Guyot, S Strickler… - Nature …, 2024 - nature.com
Coffea arabica, an allotetraploid hybrid of Coffea eugenioides and Coffea canephora, is the
source of approximately 60% of coffee products worldwide, and its cultivated accessions …

Community-wide genome sequencing reveals 30 years of Darwin's finch evolution

ED Enbody, AT Sendell-Price, CG Sprehn, CJ Rubin… - Science, 2023 - science.org
A fundamental goal in evolutionary biology is to understand the genetic architecture of
adaptive traits. Using whole-genome data of 3955 of Darwin's finches on the Galápagos …

A rapid rate of sex-chromosome turnover and non-random transitions in true frogs

DL Jeffries, G Lavanchy, R Sermier, MJ Sredl… - Nature …, 2018 - nature.com
The canonical model of sex-chromosome evolution predicts that, as recombination is
suppressed along sex chromosomes, gametologs will progressively differentiate, eventually …

The genome of broomcorn millet

C Zou, L Li, D Miki, D Li, Q Tang, L Xiao… - Nature …, 2019 - nature.com
Broomcorn millet (Panicum miliaceum L.) is the most water-efficient cereal and one of the
earliest domesticated plants. Here we report its high-quality, chromosome-scale genome …

A few essential genetic loci distinguish Penstemon species with flowers adapted to pollination by bees or hummingbirds

CA Wessinger, AM Katzer, PM Hime, MD Rausher… - PLoS …, 2023 - journals.plos.org
In the formation of species, adaptation by natural selection generates distinct combinations
of traits that function well together. The maintenance of adaptive trait combinations in the …

Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level

J Gutiérrez-Valencia, M Fracassetti, EL Berdan… - Current Biology, 2022 - cell.com
Supergenes govern multi-trait-balanced polymorphisms in a wide range of systems;
however, our understanding of their origins and evolution remains incomplete. The …

Ancient and recent introgression shape the evolutionary history of pollinator adaptation and speciation in a model monkeyflower radiation (Mimulus section …

TC Nelson, AM Stathos, DD Vanderpool… - PLoS …, 2021 - journals.plos.org
Inferences about past processes of adaptation and speciation require a gene-scale and
genome-wide understanding of the evolutionary history of diverging taxa. In this study, we …