Generating and using transcriptomically based retinal cell atlases

K Shekhar, JR Sanes - Annual Review of Vision Science, 2021 - annualreviews.org
It has been known for over a century that the basic organization of the retina is conserved
across vertebrates. It has been equally clear that retinal cells can be classified into …

[HTML][HTML] Single-cell RNA-seq analysis of retinal development identifies NFI factors as regulating mitotic exit and late-born cell specification

BS Clark, GL Stein-O'Brien, F Shiau, GH Cannon… - Neuron, 2019 - cell.com
Precise temporal control of gene expression in neuronal progenitors is necessary for correct
regulation of neurogenesis and cell fate specification. However, the cellular heterogeneity of …

[HTML][HTML] A single-cell guide to retinal development: Cell fate decisions of multipotent retinal progenitors in scRNA-seq

F Shiau, PA Ruzycki, BS Clark - Developmental biology, 2021 - Elsevier
Recent advances in high throughput single-cell RNA sequencing (scRNA-seq) technology
have enabled the simultaneous transcriptomic profiling of thousands of individual cells in a …

Molecular signatures of retinal ganglion cells revealed through single cell profiling

LA Laboissonniere, JJ Goetz, GM Martin, R Bi… - Scientific reports, 2019 - nature.com
Retinal ganglion cells can be classified into more than 40 distinct subtypes, whether by
functional classification or transcriptomics. The examination of these subtypes in relation to …

Molecular basis of retinal remodeling in a zebrafish model of retinitis pigmentosa

A Santhanam, E Shihabeddin, H Wei, J Wu… - Cellular and Molecular …, 2023 - Springer
A hallmark of inherited retinal degenerative diseases such as retinitis pigmentosa (RP) is
progressive structural and functional remodeling of the remaining retinal cells as …

Chromatin accessibility and transcriptional differences in human stem cell-derived early-stage retinal organoids

MK Jones, D Agarwal, KW Mazo, M Chopra, SL Jurlina… - Cells, 2022 - mdpi.com
Retinogenesis involves the specification of retinal cell types during early vertebrate
development. While model organisms have been critical for determining the role of dynamic …

Blue light exposure collapses the inner blood-retinal barrier by accelerating endothelial CLDN5 degradation through the disturbance of GNAZ and the activation of …

YJ Chan, G Hsiao, WN Wan, TM Yang, CH Tsai… - Fluids and Barriers of …, 2023 - Springer
Blue light is part of the natural light spectrum that emits high energy. Currently, people are
frequently exposed to blue light from 3C devices, resulting in a growing incidence of …

Latent epigenetic programs in Müller glia contribute to stress and disease response in the retina

JL Norrie, MS Lupo, DR Little, A Shirinifard, A Mishra… - Developmental Cell, 2025 - cell.com
Previous studies have demonstrated the dynamic changes in chromatin structure during
retinal development correlate with changes in gene expression. However, those studies lack …

Reviewing guppy color vision: integrating the molecular and physiological variation in visual tuning of a classic system for sensory drive

B Sandkam, B Dalton, F Breden, K Carleton - Current zoology, 2018 - academic.oup.com
Sensory drive predicts coevolution of mate choice signals with the sensory systems
detecting those signals. Guppies are a classic model for sensory drive as mate preferences …

Comprehensive analysis of retinal development at single cell resolution identifies NFI factors as essential for mitotic exit and specification of late-born cells

BS Clark, GL Stein-O'Brien, F Shiau, GH Cannon… - BioRxiv, 2018 - biorxiv.org
Precise temporal control of gene expression in neuronal progenitors is necessary for correct
regulation of neurogenesis and cell fate specification. However, the extensive cellular …