Clinical application of advanced multi-omics tumor profiling: Shaping precision oncology of the future

D Akhoundova, MA Rubin - Cancer Cell, 2022 - cell.com
Next-generation DNA sequencing technology has dramatically advanced clinical oncology
through the identification of therapeutic targets and molecular biomarkers, leading to the …

Circulating tumor DNA minimal residual disease detection of non–small-cell lung cancer treated with curative intent

B Pellini, AA Chaudhuri - Journal of Clinical Oncology, 2022 - ascopubs.org
Circulating tumor DNA (ctDNA) minimal residual disease (MRD) is a powerful biomarker
with the potential to improve survival outcomes for non–small-cell lung cancer (NSCLC) …

A longitudinal circulating tumor DNA-based model associated with survival in metastatic non-small-cell lung cancer

ZJF Assaf, W Zou, AD Fine, MA Socinski, A Young… - Nature Medicine, 2023 - nature.com
One of the great challenges in therapeutic oncology is determining who might achieve
survival benefits from a particular therapy. Studies on longitudinal circulating tumor DNA …

[HTML][HTML] Recommendations for a practical implementation of circulating tumor DNA mutation testing in metastatic non-small-cell lung cancer

E Heitzer, D Van Den Broek, MG Denis, P Hofman… - ESMO open, 2022 - Elsevier
Background Liquid biopsy (LB) is a rapidly evolving diagnostic tool for precision oncology
that has recently found its way into routine practice as an adjunct to tissue biopsy (TB). The …

[HTML][HTML] Genomic approaches to cancer and minimal residual disease detection using circulating tumor DNA

NP Semenkovich, JJ Szymanski… - … for immunotherapy of …, 2023 - ncbi.nlm.nih.gov
Liquid biopsies using cell-free circulating tumor DNA (ctDNA) are being used frequently in
both research and clinical settings. ctDNA can be used to identify actionable mutations to …

[HTML][HTML] A clinician's guide to bioinformatics for next-generation sequencing

NB Larson, AL Oberg, AA Adjei, L Wang - Journal of Thoracic Oncology, 2023 - Elsevier
Next-generation sequencing (NGS) technologies are high-throughput methods for DNA
sequencing and have become a widely adopted tool in cancer research. The sheer amount …

Dynamic changes of circulating tumor DNA predict clinical outcome in patients with advanced non–small-cell lung cancer treated with immune checkpoint inhibitors

S Weber, P van der Leest, HC Donker… - JCO Precision …, 2021 - ascopubs.org
PURPOSE Immune checkpoint inhibitors (ICIs) are increasingly being used in non–small-
cell lung cancer (NSCLC), yet biomarkers predicting their benefit are lacking. We evaluated …

ctDNA predicts overall survival in patients with NSCLC treated with PD-L1 blockade or with chemotherapy

W Zou, SJ Yaung, F Fuhlbrück, M Ballinger… - JCO Precision …, 2021 - ascopubs.org
PURPOSE Identification of predictors for overall survival (OS) allows timely detection of
clinical efficacy signals and therefore facilitates treatment decisions. We assessed the …

ctDNA MRD detection and personalized oncogenomic analysis in oligometastatic colorectal cancer from plasma and urine

B Pellini, N Pejovic, W Feng, N Earland… - JCO Precision …, 2021 - ascopubs.org
PURPOSE We hypothesized that circulating tumor DNA (ctDNA) molecular residual disease
(MRD) analysis without prior mutational knowledge could be performed after neoadjuvant …

[HTML][HTML] Cost-effective and scalable clonal hematopoiesis assay provides insight into clonal dynamics

T Mack, C Vlasschaert, K von Beck, AJ Silver… - The Journal of Molecular …, 2024 - Elsevier
Clonal hematopoiesis of indeterminate potential (CHIP) is a common age-related
phenomenon in which hematopoietic stem cells acquire mutations in a select set of genes …