Recent developments in symmetry‐adapted perturbation theory

K Patkowski - Wiley Interdisciplinary Reviews: Computational …, 2020 - Wiley Online Library
Symmetry‐adapted perturbation theory (SAPT) is a well‐established method to compute
accurate intermolecular interaction energies in terms of physical effects such as …

Perfluoroaryl⋯ aryl interaction: The most important subset of π-hole⋯ π bonding

W Wang, WX Wu, Y Zhang, WJ Jin - Chemical Physics Reviews, 2024 - pubs.aip.org
The perfluoroaryl⋯ aryl interaction, the most important subset of π-hole⋯ π bonding, refers to
the attractive stacking interaction between a perfluoroaryl group and an aryl group. In …

Toward a more complete understanding of noncovalent interactions involving aromatic rings

SE Wheeler, JWG Bloom - The journal of physical chemistry A, 2014 - ACS Publications
Noncovalent interactions involving aromatic rings, which include π-stacking interactions,
anion-π interactions, and XH− π interactions, among others, are ubiquitous in chemical and …

Predicting the strength of stacking interactions between heterocycles and aromatic amino acid side chains

AN Bootsma, AC Doney… - Journal of the American …, 2019 - ACS Publications
Despite the ubiquity of stacking interactions between heterocycles and aromatic amino acids
in biological systems, our ability to predict their strength, even qualitatively, is limited. On the …

Chemical assignment of symmetry-adapted perturbation theory interaction energy components: the functional-group SAPT partition

RM Parrish, TM Parker, CD Sherrill - Journal of chemical theory …, 2014 - ACS Publications
Recently, we introduced an effective atom-pairwise partition of the many-body symmetry-
adapted perturbation theory (SAPT) interaction energy decomposition, producing a method …

Neat, simple, and wrong: Debunking electrostatic fallacies regarding noncovalent interactions

JM Herbert - The Journal of Physical Chemistry A, 2021 - ACS Publications
Multipole moments such as charge, dipole, and quadrupole are often invoked to rationalize
intermolecular phenomena, but a low-order multipole expansion is rarely a valid description …

Stacking principles on π-and lamellar stacking for organic semiconductors evaluated by energy decomposition analysis

YY Lai, VH Huang, HT Lee, HR Yang - ACS omega, 2018 - ACS Publications
Two stacking manners, that is, π-and lamellar stacking, are generally found for organic
semiconductors, in which the π-stacking occurs between conjugated groups and the …

Tuning stacking interactions between asp–arg salt bridges and heterocyclic drug fragments

AN Bootsma, SE Wheeler - Journal of Chemical Information and …, 2018 - ACS Publications
Stacking interactions can play an integral role in the strength and selectivity of protein–drug
binding and are of particular interest given the ubiquity and variety of heterocyclic fragments …

Stacking interactions of heterocyclic drug fragments with protein amide backbones

AN Bootsma, SE Wheeler - ChemMedChem, 2018 - Wiley Online Library
Stacking interactions can be important enthalpic contributors to drug binding. Among the
less well‐studied stacking interactions are those occurring between an arene and the π …

Quantifying the π-stacking interactions in nitroarene binding sites of proteins

Y An, JWG Bloom, SE Wheeler - The Journal of Physical …, 2015 - ACS Publications
Stacking interactions in nitroarene binding sites of proteins were studied through analyses of
structures in the protein data bank (PDB), as well as DFT and ab initio computations applied …