Machine learning methods for small data challenges in molecular science

B Dou, Z Zhu, E Merkurjev, L Ke, L Chen… - Chemical …, 2023 - ACS Publications
Small data are often used in scientific and engineering research due to the presence of
various constraints, such as time, cost, ethics, privacy, security, and technical limitations in …

A comprehensive survey on deep clustering: Taxonomy, challenges, and future directions

S Zhou, H Xu, Z Zheng, J Chen, Z Li, J Bu, J Wu… - ACM Computing …, 2024 - dl.acm.org
Clustering is a fundamental machine learning task, which aim at assigning instances into
groups so that similar samples belong to the same cluster while dissimilar samples belong …

Slide-tags enables single-nucleus barcoding for multimodal spatial genomics

AJC Russell, JA Weir, NM Nadaf, M Shabet, V Kumar… - Nature, 2024 - nature.com
Recent technological innovations have enabled the high-throughput quantification of gene
expression and epigenetic regulation within individual cells, transforming our understanding …

A comprehensive survey of clustering algorithms

D Xu, Y Tian - Annals of data science, 2015 - Springer
Data analysis is used as a common method in modern science research, which is across
communication science, computer science and biology science. Clustering, as the basic …

A survey of density based clustering algorithms

P Bhattacharjee, P Mitra - Frontiers of Computer Science, 2021 - Springer
Density based clustering algorithms (DBCLAs) rely on the notion of density to identify
clusters of arbitrary shapes, sizes with varying densities. Existing surveys on DBCLAs cover …

A survey of clustering algorithms for big data: Taxonomy and empirical analysis

A Fahad, N Alshatri, Z Tari, A Alamri… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
Clustering algorithms have emerged as an alternative powerful meta-learning tool to
accurately analyze the massive volume of data generated by modern applications. In …

Algorithms for hierarchical clustering: an overview, II

F Murtagh, P Contreras - Wiley Interdisciplinary Reviews: Data …, 2017 - Wiley Online Library
We survey agglomerative hierarchical clustering algorithms and discuss efficient
implementations that are available in R and other software environments. We look at …

Study on density peaks clustering based on k-nearest neighbors and principal component analysis

M Du, S Ding, H Jia - Knowledge-Based Systems, 2016 - Elsevier
Density peaks clustering (DPC) algorithm published in the US journal Science in 2014 is a
novel clustering algorithm based on density. It needs neither iterative process nor more …

Hybrid fruit-fly optimization algorithm with k-means for text document clustering

T Bezdan, C Stoean, AA Naamany, N Bacanin… - Mathematics, 2021 - mdpi.com
The fast-growing Internet results in massive amounts of text data. Due to the large volume of
the unstructured format of text data, extracting relevant information and its analysis becomes …

Algorithms for hierarchical clustering: an overview

F Murtagh, P Contreras - Wiley Interdisciplinary Reviews: Data …, 2012 - Wiley Online Library
We survey agglomerative hierarchical clustering algorithms and discuss efficient
implementations that are available in R and other software environments. We look at …