The relationship between the gut microbiome and host gene expression: a review

RG Nichols, ER Davenport - Human genetics, 2021 - Springer
Despite the growing knowledge surrounding host–microbiome interactions, we are just
beginning to understand how the gut microbiome influences—and is influenced by—host …

Microbiota and mucosal defense in IBD: an update

EF Stange, BO Schroeder - Expert review of gastroenterology & …, 2019 - Taylor & Francis
Introduction: Inflammatory bowel diseases (IBD) are on the rise worldwide. This review
covers the current concepts of the etiology of Crohn´ s disease and ulcerative colitis by …

Identification of shared and disease-specific host gene–microbiome associations across human diseases using multi-omic integration

S Priya, MB Burns, T Ward, RAT Mars… - Nature …, 2022 - nature.com
While gut microbiome and host gene regulation independently contribute to gastrointestinal
disorders, it is unclear how the two may interact to influence host pathophysiology. Here we …

[HTML][HTML] Therapeutic interleukin-6 trans-signaling inhibition by olamkicept (sgp130Fc) in patients with active inflammatory bowel disease

S Schreiber, K Aden, JP Bernardes, C Conrad, F Tran… - Gastroenterology, 2021 - Elsevier
Background & Aims A large unmet therapeutic need exists in inflammatory bowel disease
(IBD). Inhibition of interleukin (IL)-6 appears to be effective, but the therapeutic benefit of a …

[HTML][HTML] Metabolic functions of gut microbes associate with efficacy of tumor necrosis factor antagonists in patients with inflammatory bowel diseases

K Aden, A Rehman, S Waschina, WH Pan, A Walker… - Gastroenterology, 2019 - Elsevier
Background & Aims Altered interactions between the mucosal immune system and intestinal
microbiota contribute to pathogenesis of inflammatory bowel diseases (IBD). It is not clear …

[HTML][HTML] DNA methylation and transcription patterns in intestinal epithelial cells from pediatric patients with inflammatory bowel diseases differentiate disease subtypes …

KJ Howell, J Kraiczy, KM Nayak, M Gasparetto, A Ross… - Gastroenterology, 2018 - Elsevier
Background & Aims We analyzed DNA methylation patterns and transcriptomes of primary
intestinal epithelial cells (IEC) of children newly diagnosed with inflammatory bowel …

Microbial regulation of hexokinase 2 links mitochondrial metabolism and cell death in colitis

F Hinrichsen, J Hamm, M Westermann, L Schröder… - Cell Metabolism, 2021 - cell.com
Hexokinases (HK) catalyze the first step of glycolysis limiting its pace. HK2 is highly
expressed in gut epithelium, contributes to immune responses, and is upregulated during …

Big data in IBD: big progress for clinical practice

NSS Tabib, M Madgwick, P Sudhakar, B Verstockt… - Gut, 2020 - gut.bmj.com
IBD is a complex multifactorial inflammatory disease of the gut driven by extrinsic and
intrinsic factors, including host genetics, the immune system, environmental factors and the …

Human retinoic acid–regulated CD161+ regulatory T cells support wound repair in intestinal mucosa

GAM Povoleri, E Nova-Lamperti, C Scottà… - Nature …, 2018 - nature.com
Repair of tissue damaged during inflammatory processes is key to the return of local
homeostasis and restoration of epithelial integrity. Here we describe CD161+ regulatory T …

[HTML][HTML] Maternal cecal microbiota transfer rescues early-life antibiotic-induced enhancement of type 1 diabetes in mice

XS Zhang, YS Yin, J Wang, T Battaglia, K Krautkramer… - Cell host & …, 2021 - cell.com
Early-life antibiotic exposure perturbs the intestinal microbiota and accelerates type 1
diabetes (T1D) development in the NOD mouse model. Here, we found that maternal cecal …