Core competencies for clinical informaticians: a systematic review

A Davies, J Mueller, G Moulton - International journal of medical informatics, 2020 - Elsevier
Background Building on initial work carried out by the Faculty of Clinical Informatics (FCI) in
the UK, the creation of a national competency framework for Clinical Informatics is required …

Community-driven data analysis training for biology

B Batut, S Hiltemann, A Bagnacani, D Baker… - Cell systems, 2018 - cell.com
The primary problem with the explosion of biomedical datasets is not the data, not
computational resources, and not the required storage space, but the general lack of trained …

The bio.tools registry of software tools and data resources for the life sciences

J Ison, H Ienasescu, P Chmura, E Rydza, H Ménager… - Genome biology, 2019 - Springer
Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of
the many life science tools that are needed to optimally convert data into knowledge. We …

Deep learning for the PSIPRED Protein Analysis Workbench

DWA Buchan, L Moffat, A Lau… - Nucleic Acids …, 2024 - academic.oup.com
The PSIRED Workbench is a long established and popular bioinformatics web service
offering a wide range of machine learning based analyses for characterizing protein …

[HTML][HTML] Development of a core competency framework for clinical informatics

A Davies, J Mueller, A Hassey… - BMJ health & care …, 2021 - ncbi.nlm.nih.gov
Objectives Until this point there was no national core competency framework for clinical
informatics in the UK. We report on the final two iterations of work carried out in the formation …

TeSS: a platform for discovering life-science training opportunities

N Beard, F Bacall, A Nenadic, M Thurston… - …, 2020 - academic.oup.com
Dispersed across the Internet is an abundance of disparate, disconnected training
information, making it hard for researchers to find training opportunities that are relevant to …

Community curation of bioinformatics software and data resources

J Ison, H Ménager, B Brancotte, E Jaaniso… - Briefings in …, 2020 - academic.oup.com
The corpus of bioinformatics resources is huge and expanding rapidly, presenting life
scientists with a growing challenge in selecting tools that fit the desired purpose. To address …

The Mastery Rubric for Bioinformatics: A tool to support design and evaluation of career-spanning education and training

RE Tractenberg, JM Lindvall, TK Attwood, A Via - PLoS One, 2019 - journals.plos.org
As the life sciences have become more data intensive, the pressure to incorporate the
requisite training into life-science education and training programs has increased. To …

[HTML][HTML] Creation of a core competency framework for clinical informatics: From genesis to maintaining relevance

A Davies, A Hassey, J Williams, G Moulton - International Journal of …, 2022 - Elsevier
Abstract Background The United Kingdom's Faculty of Clinical Informatics (FCI) embarked
on the creation of a core competency framework in response to the need to provide support …

ENCORE: a practical implementation to improve reproducibility and transparency of computational research

AHC van Kampen, U Mahamune, A Jongejan… - Nature …, 2024 - nature.com
Reproducibility of computational research is often challenging despite established
guidelines and best practices. Translating these guidelines into practical applications …