With the rapid advances of various high-throughput technologies, generation of '-omics' data
is commonplace in almost every biomedical field. Effective data management and analytical …

Background Genomic and other high dimensional analyses often require one to summarize
multiple related variables by a single representative. This task is also variously referred to as …

The rapid accumulation of biological networks poses new challenges and calls for powerful
integrative analysis tools. Most existing methods capable of simultaneously analyzing a …

Microarrays are one of the latest breakthroughs in experimental molecular biology that allow
monitoring the expression levels of tens of thousands of genes simultaneously. Arrays have …

Background The ability to monitor changes in expression patterns over time, and to observe
the emergence of coherent temporal responses using expression time series, is critical to …

The immense therapeutic and economic values of medicinal plants have attracted
increasing attention from the worldwide researchers. It has been recognized that production …

The rapid advances of omics technologies have generated abundant genomic data in public
repositories and effective analytical approaches are critical to fully decipher biological …

Microarray-based classifiers and associated signature genes generated from various
platforms are abundantly reported in the literature; however, the utility of the classifiers and …

Motivation: Cross-platform microarray analysis is an increasingly important research tool, but
researchers still lack open source tools for storing, integrating and analyzing large amounts …

OBJECTIVE: The limitation of small sample sizes of functional genomics experiments has
made it necessary to integrate DNA microarray experimental data for similar biological …