Sequence-specific recognition of double helical nucleic acids by proteins.

NC Seeman, JM Rosenberg… - Proceedings of the …, 1976 - National Acad Sciences
The base pairs in double helical nucleic acids have been compared to see how they can be
recognized by proteins. We conclude that a single hydrogen bond is inadequate for uniquely …

Deciphering the dynamic code: DNA recognition by transcription factors in the ever-changing genome

YM Yao, I Miodownik, MP O'Hagan, M Jbara, A Afek - Transcription, 2024 - Taylor & Francis
Transcription factors (TFs) intricately navigate the vast genomic landscape to locate and
bind specific DNA sequences for the regulation of gene expression programs. These …

Synthetic sequence-specific ligands

GV Gursky, AS Zasedatelev, AL Zhuze… - Cold Spring Harbor …, 1983 - symposium.cshlp.org
There is much interest in the design and synthesis of chemical compounds that possess
binding specificity comparable with that of bacterial repressors. These compounds could be …

[PDF][PDF] Specific recognition of guanine bases in protein-nucleic acid complexes

C Helene - Febs Lett, 1977 - core.ac.uk
1. Introduction The selective association of nucleic acids with proteins is of utmost
importance at every step of genetic expression. The most striking examples include the …

Quantitative estimation of the contribution of pyrrolcarboxamide groups of the antibiotic distamycin A into specificity of its binding to DNA AT pairs

AS Krylov, SL Grokhovsky, AS Zasedatelev… - Nucleic Acids …, 1979 - academic.oup.com
Interaction of DNA with the analogs of the antibiotic distamycin A having different numbers of
pyrrolcarboxamide groups and labeled with dansyl was studied. The binding isoterms of the …

[PDF][PDF] Thermodynamic and stereochemical aspects of binding interactions between sequence-specific ligands and DNA

GV Gursky, AS Zasedatelev - Sov. Sci. Rev. D Physicochem. Biol, 1984 - researchgate.net
The specificity of binding interactions between regulatory proteins and DNA is a
consequence of cqmplementarity between the sequences of specific reaction centers on the …

Analysis of binding of ligands to nucleic acids

YD Nechipurenko - Biophysics, 2014 - Springer
The review demonstrates an application of methods of statistical thermodynamics for the
analysis of binding of ligands to DNA and RNA. Reversible binding of ligands to nucleic …

Crystal and molecular structure of 3-(adenin-9-yl) propiontryptamide.

M Ohki, A Takenaka, H Shimanouchi… - Bulletin of the Chemical …, 1977 - jlc.jst.go.jp
The crystal structure of 3-(adenin-9-yl) propiontryptamide (3-(adenin-9-yl)-N-[2-(3-indolyl)
ethyl] propionamide) has been investigated as a model for adenine-tryptophan interaction …

Геометрический анализ ДНК-белковых взаимодействий на основе методз Вороного-Делоне

АА Анашкина, ВГ Туманян, ЕН Кузнецов, АВ Галкин… - Биофизика, 2008 - elibrary.ru
Разработан новый метод анализа непосредственных ДНК-белковых контактов па
основе разбиения Вороного. На основе изучения 1109 комплексов белок-ДНК из банка …

Elements of a DNA-polypeptide recognition code: Electrostatic potential around the double helix, and a stereospecific model for purine recognition

R Rein, R Garduno, JT Egan, S Columbano… - Biosystems, 1977 - Elsevier
A model for stereospecific complex between a polynucleotide double helix and a twisted β-
ribbon type polypeptide is described. The β ribbon lies in the major groove with alternate …