Reproducible computational research (RCR) is the keystone of the scientific method for in silico analyses, packaging the transformation of raw data to published results. In addition to …
Provenance refers to any information describing the production process of an end product, which can be anything from a piece of digital data to a physical object. While this survey …
Data provenance describes how data came to be in its present form. It includes data sources and the transformations that have been applied to them. Data provenance has many uses …
Scientific workflow management systems offer features for composing complex computational pipelines from modular building blocks, for executing the resulting automated …
Network ecology provides a systems basis for approaching ecological questions, such as factors that influence biological diversity, the role of particular species or particular traits in …
Scripts are widely used to design and run scientific experiments. Scripting languages are easy to learn and use, and they allow complex tasks to be specified and executed in fewer …
The designers of a new coordination interface enacting complex workflows have to tackle a dichotomy: choosing a language-independent or language-dependent approach. Language …
The noWorkflow and YesWorkflow toolkits both enable researchers to capture, store, query, and visualize the provenance of results produced by scripts that process scientific data …
J Freire, F Chirigati - IEEE Data Engineering Bulletin, 2018 - scholar.archive.org
While reproducibility has been a requirement in natural sciences for centuries, computational experiments have not followed the same standard. Often, there is insufficient …