Runs of homozygosity: windows into population history and trait architecture

FC Ceballos, PK Joshi, DW Clark, M Ramsay… - Nature Reviews …, 2018 - nature.com
Long runs of homozygosity (ROH) arise when identical haplotypes are inherited from each
parent and thus a long tract of genotypes is homozygous. Cousin marriage or inbreeding …

Runs of homozygosity: current knowledge and applications in livestock

E Peripolli, DP Munari, M Silva, ALF Lima… - Animal …, 2017 - Wiley Online Library
This review presents a broader approach to the implementation and study of runs of
homozygosity (ROH) in animal populations, focusing on identifying and characterizing ROH …

How to study runs of homozygosity using PLINK? A guide for analyzing medium density SNP data in livestock and pet species

R Meyermans, W Gorssen, N Buys, S Janssens - BMC genomics, 2020 - Springer
Background PLINK is probably the most used program for analyzing SNP genotypes and
runs of homozygosity (ROH), both in human and in animal populations. The last decade …

Target genes, variants, tissues and transcriptional pathways influencing human serum urate levels

A Tin, J Marten, VL Halperin Kuhns, Y Li, M Wuttke… - Nature …, 2019 - nature.com
Elevated serum urate levels cause gout and correlate with cardiometabolic diseases via
poorly understood mechanisms. We performed a trans-ancestry genome-wide association …

Runs of homozygosity and population history in cattle

DC Purfield, DP Berry, S McParland, DG Bradley - BMC genetics, 2012 - Springer
Background Runs of homozygosity (ROH) are contiguous lengths of homozygous genotypes
that are present in an individual due to parents transmitting identical haplotypes to their …

Inbreeding and runs of homozygosity: A possible solution to an old problem

I Curik, M Ferenčaković, J Sölkner - Livestock science, 2014 - Elsevier
Quantifying human, plant and livestock inbreeding has been an important goal of
evolutionary biologists and agricultural scientists for nearly a century, and methods to do so …

[HTML][HTML] Genomic patterns of homozygosity in worldwide human populations

TJ Pemberton, D Absher, MW Feldman… - The American Journal of …, 2012 - cell.com
Genome-wide patterns of homozygosity runs and their variation across individuals provide a
valuable and often untapped resource for studying human genetic diversity and evolutionary …

[HTML][HTML] Runs of homozygosity in European populations

R McQuillan, AL Leutenegger, R Abdel-Rahman… - The American Journal of …, 2008 - cell.com
Estimating individual genome-wide autozygosity is important both in the identification of
recessive disease variants via homozygosity mapping and in the investigation of the effects …

Genomics advances the study of inbreeding depression in the wild

M Kardos, HR Taylor, H Ellegren… - Evolutionary …, 2016 - Wiley Online Library
Inbreeding depression (reduced fitness of individuals with related parents) has long been a
major focus of ecology, evolution, and conservation biology. Despite decades of research …

The distribution of runs of homozygosity and selection signatures in six commercial meat sheep breeds

DC Purfield, S McParland, E Wall, DP Berry - PloS one, 2017 - journals.plos.org
Domestication and the subsequent selection of animals for either economic or
morphological features can leave a variety of imprints on the genome of a population …