Scaling logical density of DNA storage with enzymatically-ligated composite motifs
Y Yan, N Pinnamaneni, S Chalapati, C Crosbie… - Scientific Reports, 2023 - nature.com
DNA is a promising candidate for long-term data storage due to its high density and
endurance. The key challenge in DNA storage today is the cost of synthesis. In this work, we …
endurance. The key challenge in DNA storage today is the cost of synthesis. In this work, we …
Assessing opportunities of SYCL for biological sequence alignment on GPU-based systems
Bioinformatics and computational biology are two fields that have been exploiting GPUs for
more than two decades, with being CUDA the most used programming language for them …
more than two decades, with being CUDA the most used programming language for them …
Oligoarchive-dsm: Columnar design for error-tolerant database archival using synthetic dna
E Marinelli, Y Yan, V Magnone, MC Dumargne… - bioRxiv, 2022 - biorxiv.org
The surge in demand for cost-effective, durable long-term archival media, coupled with
density limitations of contemporary magnetic media, has resulted in synthetic DNA emerging …
density limitations of contemporary magnetic media, has resulted in synthetic DNA emerging …
Towards Migration-Free" Just-in-Case" Data Archival for Future Cloud Data Lakes Using Synthetic DNA
E Marinelli, Y Yan, V Magnone, C Dumargne… - Proceedings of the …, 2023 - dl.acm.org
Given the growing adoption of AI, cloud data lakes are facing the need to support cost-
effective" just-in-case" data archival over long time periods to meet regulatory compliance …
effective" just-in-case" data archival over long time periods to meet regulatory compliance …
Assessing Intel OneAPI capabilities and cloud-performance for heterogeneous computing
This work presents a performance-oriented study of a heterogeneous application developed
with Intel OneAPI to solve two well-known diffusion problems: heat diffusion and image …
with Intel OneAPI to solve two well-known diffusion problems: heat diffusion and image …
CMOSS: A Reliable, Motif-based Columnar Molecular Storage System
The surge in demand for cost-effective, durable long-term archival media, coupled with
density limitations of contemporary magnetic media, has resulted in synthetic DNA emerging …
density limitations of contemporary magnetic media, has resulted in synthetic DNA emerging …
Digital Preservation with Synthetic DNA
The growing adoption of AI and data analytics in various sectors has resulted in digital
preservation emerging as a cross-sectoral problem that affects everyone from data-driven …
preservation emerging as a cross-sectoral problem that affects everyone from data-driven …
HPC Workflow on Diverse XPU Architectures with oneAPI
High Performance Computing (HPC) workloads necessitate a variety of hardware, including
scalar, vector, matrix, and spatial architectures. The biggest challenge came from a …
scalar, vector, matrix, and spatial architectures. The biggest challenge came from a …
Towards Passive, Migration-Free, Standardized, Long-Term Database Archival
R Appuswamy - ACM SIGMOD Record, 2022 - dl.acm.org
" How would you archive databases for the next 60 years such that they incur no migration
cost, and they remain usable in 2080?" This was an open challenge raised by digital …
cost, and they remain usable in 2080?" This was an open challenge raised by digital …
Assessing Intel OneAPI capabilities and cloud-performance for heterogeneous computing
S Rodríguez Alcaraz, R Laso Rodríguez… - 2024 - minerva.usc.es
This work presents a performance-oriented study of a heterogeneous application developed
with Intel OneAPI to solve two well-known diffusion problems: heat diffusion and image …
with Intel OneAPI to solve two well-known diffusion problems: heat diffusion and image …