Tissue clearing and its applications in neuroscience

HR Ueda, A Ertürk, K Chung, V Gradinaru… - Nature Reviews …, 2020 - nature.com
State-of-the-art tissue-clearing methods provide subcellular-level optical access to intact
tissues from individual organs and even to some entire mammals. When combined with light …

Tissue clearing

DS Richardson, W Guan, K Matsumoto, C Pan… - Nature Reviews …, 2021 - nature.com
Tissue clearing of gross anatomical samples was first described more than a century ago
and has only recently found widespread use in the field of microscopy. This renaissance has …

Adeno-associated viral vectors for functional intravenous gene transfer throughout the non-human primate brain

MR Chuapoco, NC Flytzanis, N Goeden… - Nature …, 2023 - nature.com
Crossing the blood–brain barrier in primates is a major obstacle for gene delivery to the
brain. Adeno-associated viruses (AAVs) promise robust, non-invasive gene delivery from the …

Physiological blood–brain transport is impaired with age by a shift in transcytosis

AC Yang, MY Stevens, MB Chen, DP Lee, D Stähli… - Nature, 2020 - nature.com
The vascular interface of the brain, known as the blood–brain barrier (BBB), is understood to
maintain brain function in part via its low transcellular permeability,–. Yet, recent studies …

Gut-seeded α-synuclein fibrils promote gut dysfunction and brain pathology specifically in aged mice

C Challis, A Hori, TR Sampson, BB Yoo… - Nature …, 2020 - nature.com
Parkinson's disease is a synucleinopathy that is characterized by motor dysfunction, death of
midbrain dopaminergic neurons and accumulation of α-synuclein (α-Syn) aggregates …

Panoptic imaging of transparent mice reveals whole-body neuronal projections and skull–meninges connections

R Cai, C Pan, A Ghasemigharagoz, MI Todorov… - Nature …, 2019 - nature.com
Abstract Analysis of entire transparent rodent bodies after clearing could provide holistic
biological information in health and disease, but reliable imaging and quantification of …

Expansion microscopy: principles and uses in biological research

AT Wassie, Y Zhao, ES Boyden - Nature methods, 2019 - nature.com
Many biological investigations require 3D imaging of cells or tissues with nanoscale spatial
resolution. We recently discovered that preserved biological specimens can be physically …

Integration of optogenetics with complementary methodologies in systems neuroscience

CK Kim, A Adhikari, K Deisseroth - Nature Reviews Neuroscience, 2017 - nature.com
Modern optogenetics can be tuned to evoke activity that corresponds to naturally occurring
local or global activity in timing, magnitude or individual-cell patterning. This outcome has …

Cre-dependent selection yields AAV variants for widespread gene transfer to the adult brain

BE Deverman, PL Pravdo, BP Simpson… - Nature …, 2016 - nature.com
Recombinant adeno-associated viruses (rAAVs) are commonly used vehicles for in vivo
gene transfer 1, 2, 3, 4, 5, 6. However, the tropism repertoire of naturally occurring AAVs is …

In situ transcription profiling of single cells reveals spatial organization of cells in the mouse hippocampus

S Shah, E Lubeck, W Zhou, L Cai - Neuron, 2016 - cell.com
Identifying the spatial organization of tissues at cellular resolution from single-cell gene
expression profiles is essential to understanding biological systems. Using an in situ 3D …