Molecular recognition in chemical and biological systems

E Persch, O Dumele, F Diederich - … Chemie International Edition, 2015 - Wiley Online Library
Abstract Structure‐based ligand design in medicinal chemistry and crop protection relies on
the identification and quantification of weak noncovalent interactions and understanding the …

The hydrophobic effect revisited—studies with supramolecular complexes imply high‐energy water as a noncovalent driving force

F Biedermann, WM Nau… - Angewandte Chemie …, 2014 - Wiley Online Library
Traditional descriptions of the hydrophobic effect on the basis of entropic arguments or the
calculation of solvent‐occupied surfaces must be questioned in view of new results obtained …

Application of molecular docking in elaborating molecular mechanisms and interactions of supramolecular cyclodextrin

T Li, R Guo, Q Zong, G Ling - Carbohydrate polymers, 2022 - Elsevier
The cyclodextrin (CD)-based supramolecular nanomedicines have attracted growing
interest because of their superior characteristics, including desirable biocompatibility, low …

Glucose sensing in supramolecular chemistry

X Sun, TD James - Chemical Reviews, 2015 - ACS Publications
The world is made up of fundamental elements, ions and molecules that continuously
interact with each other through a series of chemical reactions. Thus, it is important to have a …

Water networks contribute to enthalpy/entropy compensation in protein–ligand binding

B Breiten, MR Lockett, W Sherman… - Journal of the …, 2013 - ACS Publications
The mechanism (or mechanisms) of enthalpy–entropy (H/S) compensation in protein–ligand
binding remains controversial, and there are still no predictive models (theoretical or …

New insights into the role of water in biological function: Studying solvated biomolecules using terahertz absorption spectroscopy in conjunction with molecular …

V Conti Nibali, M Havenith - Journal of the American Chemical …, 2014 - ACS Publications
In life science, water is the ubiquitous solvent, sometimes even called the “matrix of life”.
There is increasing experimental and theoretical evidence that solvation water is not a …

The molecular origin of enthalpy/entropy compensation in biomolecular recognition

JM Fox, M Zhao, MJ Fink, K Kang… - Annual Review of …, 2018 - annualreviews.org
Biomolecular recognition can be stubborn; changes in the structures of associating
molecules, or the environments in which they associate, often yield compensating changes …

Recent development of boronic acid-based fluorescent sensors

G Fang, H Wang, Z Bian, J Sun, A Liu, H Fang, B Liu… - RSC …, 2018 - pubs.rsc.org
As Lewis acids, boronic acids can bind with 1, 2-or 1, 3-diols in aqueous solution reversibly
and covalently to form five or six cyclic esters, thus resulting in significant fluorescence …

The roles of water in the protein matrix: a largely untapped resource for drug discovery

F Spyrakis, MH Ahmed, AS Bayden… - Journal of medicinal …, 2017 - ACS Publications
The value of thoroughly understanding the thermodynamics specific to a drug
discovery/design study is well known. Over the past decade, the crucial roles of water …

Perspective: Watching low-frequency vibrations of water in biomolecular recognition by THz spectroscopy

Y Xu, M Havenith - The Journal of chemical physics, 2015 - pubs.aip.org
Terahertz (THz) spectroscopy has turned out to be a powerful tool which is able to shed new
light on the role of water in biomolecular processes. The low frequency spectrum of the …