scLink: inferring sparse gene co-expression networks from single-cell expression data

WV Li, Y Li - Genomics, Proteomics and Bioinformatics, 2021 - academic.oup.com
A system-level understanding of the regulation and coordination mechanisms of gene
expression is essential for studying the complexity of biological processes in health and …

Perfluorooctanoic acid promotes recruitment and exocytosis of rodlet cells in the renal hematopoietic tissue of common carp

M Manera, G Castaldelli, L Giari - Toxics, 2023 - mdpi.com
Per-and polyfluoroalkyl substances (PFAS) are ubiquitous environmental contaminants, with
perfluorooctanoic acid (PFOA) being a prominent member. PFOA poses a risk to aquatic …

Factors influencing ship detentions: Pre-and post-pandemic analysis

Q Deng, Z Wan, J Chen - Ocean & Coastal Management, 2024 - Elsevier
Extensive research has examined the determinants of ship detentions during port state
control inspections. This study integrates market factors into the analysis of ship deficiencies …

Zero-inflation in the Multivariate Poisson Lognormal Family

B Batardière, J Chiquet, F Gindraud… - arXiv preprint arXiv …, 2024 - arxiv.org
Analyzing high-dimensional count data is a challenge and statistical model-based
approaches provide an adequate and efficient framework that preserves explainability. The …

BZINB model-based pathway analysis and module identification facilitates integration of microbiome and metabolome data

BM Lin, H Cho, C Liu, J Roach, AA Ribeiro, K Divaris… - Microorganisms, 2023 - mdpi.com
Integration of multi-omics data is a challenging but necessary step to advance our
understanding of the biology underlying human health and disease processes. To date …

Flexible multivariate zero to k inflated power series regression model with applications

H Saboori, M Doostparast - Stat, 2022 - Wiley Online Library
Inflated distributions are applied in various fields, including insurance, traffic networks and
survival analyses. First, they are defined by a baseline discrete distribution, and then, extra …

Evaluating capability of a bivariate zero-inflated poisson process

S Pal, SK Gauri - International Journal of Engineering, Science and …, 2022 - ajol.info
A zero-inflated Poisson (ZIP) distribution is commonly used for modelling zero-inflated
process data with single type of defect, and for developing appropriate tools for instituting …

Methods for Integrative Analysis of Multi-Omics Data

B Lin - 2024 - cdr.lib.unc.edu
Integrating multi-omics data has been a meaningful step in gaining a better understanding of
diseases. Currently, simple correlation-based analyses are typically used in analyzing multi …

Zero-inflation in the Multivariate Poisson Lognormal Family

J Chiquet, F Gindraud, M Mariadassou, B Batardière - 2024 - researchsquare.com
Analyzing high-dimensional count data is a challenge and statistical model-based
approaches provide an adequate and efficient framework thatpreserves explainability. The …

Modeling Adverse Events Counts in the Bulgarian Pharmacovigilance Database

L Antonov, B Kirilov, K Dokova - 2023 - preprints.org
We tested the possibility of using “adverse events count”(AEC) as a drug-risk indicator and
side-effect severity indicator. Data from 3938 adverse event (AE) reports for COVID-19 …