Structural changes in native membrane proteins monitored at subnanometer resolution with the atomic force microscope: a review

DJ Müller, CA Schoenenberger, F Schabert… - Journal of structural …, 1997 - Elsevier
Three membrane proteins, OmpF porin fromEscherichia coli, bacteriorhodopsin
fromHalobacterium salinarium, and the hexagonally packed intermediate (HPI) layer …

A survey on position‐based simulation methods in computer graphics

J Bender, M Müller, MA Otaduy… - Computer graphics …, 2014 - Wiley Online Library
The dynamic simulation of mechanical effects has a long history in computer graphics. The
classical methods in this field discretize Newton's second law in a variety of Lagrangian or …

Constraining dense hand surface tracking with elasticity

B Smith, C Wu, H Wen, P Peluse, Y Sheikh… - ACM Transactions on …, 2020 - dl.acm.org
Many of the actions that we take with our hands involve self-contact and occlusion: shaking
hands, making a fist, or interlacing our fingers while thinking. This use of of our hands …

Staggered projections for frictional contact in multibody systems

DM Kaufman, S Sueda, DL James, DK Pai - ACM SIGGRAPH Asia 2008 …, 2008 - dl.acm.org
We present a new discrete velocity-level formulation of frictional contact dynamics that
reduces to a pair of coupled projections and introduce a simple fixed-point property of this …

[PDF][PDF] A survey on position based dynamics, 2017

J Bender, M Müller, M Macklin - Proceedings of the European …, 2017 - diglib.eg.org
The physically-based simulation of mechanical effects has been an important research topic
in computer graphics for more than two decades. Classical methods in this field discretize …

[PDF][PDF] Position-Based Simulation Methods in Computer Graphics.

J Bender, M Müller, M Macklin - Eurographics (tutorials), 2015 - diglib.eg.org
The physically-based simulation of mechanical effects has been an important research topic
in computer graphics for more than two decades. Classical methods in this field discretize …

Interactive simulation of surgical needle insertion and steering

N Chentanez, R Alterovitz, D Ritchie, L Cho… - ACM SIGGRAPH 2009 …, 2009 - dl.acm.org
We present algorithms for simulating and visualizing the insertion and steering of needles
through deformable tissues for surgical training and planning. Needle insertion is an …

Highly adaptive liquid simulations on tetrahedral meshes

R Ando, N Thürey, C Wojtan - ACM Transactions on Graphics (TOG), 2013 - dl.acm.org
We introduce a new method for efficiently simulating liquid with extreme amounts of spatial
adaptivity. Our method combines several key components to drastically speed up the …

Simulating liquids and solid-liquid interactions with lagrangian meshes

P Clausen, M Wicke, JR Shewchuk… - ACM Transactions on …, 2013 - dl.acm.org
This article describes a Lagrangian finite element method that simulates the behavior of
liquids and solids in a unified framework. Local mesh improvement operations maintain a …

Deforming meshes that split and merge

C Wojtan, N Thürey, M Gross, G Turk - ACM SIGGRAPH 2009 papers, 2009 - dl.acm.org
We present a method for accurately tracking the moving surface of deformable materials in a
manner that gracefully handles topological changes. We employ a Lagrangian surface …