Controlling Much? Viral Control of Host Chromatin Dynamics
LE Kelnhofer-Millevolte, EA Arnold… - Annual Review of …, 2024 - annualreviews.org
Viruses are exemplary molecular biologists and have been integral to scientific discovery for
generations. It is therefore no surprise that nuclear replicating viruses have evolved to …
generations. It is therefore no surprise that nuclear replicating viruses have evolved to …
The MCM2-7 Complex: Roles beyond DNA Unwinding
BD Rankin, S Rankin - Biology, 2024 - mdpi.com
Simple Summary Here, we summarize what is known about the non-replication roles of
MCM helicase, best known for its ability to unwind double-stranded DNA templates during …
MCM helicase, best known for its ability to unwind double-stranded DNA templates during …
[HTML][HTML] Multiscale molecular modeling of chromatin with MultiMM: From nucleosomes to the whole genome
S Korsak, K Banecki, D Plewczynski - Computational and Structural …, 2024 - Elsevier
Motivation: We present a user-friendly 3D chromatin simulation model for the human
genome based on OpenMM, addressing the challenges posed by existing models with use …
genome based on OpenMM, addressing the challenges posed by existing models with use …
LoopSage: An energy-based Monte Carlo approach for the loop extrusion modeling of chromatin
S Korsak, D Plewczynski - Methods, 2024 - Elsevier
The connection between the patterns observed in 3C-type experiments and the modeling of
polymers remains unresolved. This paper presents a simulation pipeline that generates …
polymers remains unresolved. This paper presents a simulation pipeline that generates …
[图书][B] Vertebrate Pattern Formation
M Mallo - 2024 - books.google.com
Vertebrate Pattern Formation, Volume 159 in the Current Topics in Developmental Biology
series, highlights advances in the field, with this volume presenting interesting chapters on …
series, highlights advances in the field, with this volume presenting interesting chapters on …
The challenge of chromatin model comparison and validation a project from the first international 4D Nucleome Hackathon
The computational modeling of chromatin structure is highly complex and challenging due to
the hierarchical organization of chromatin, which reflects its diverse biophysical principles …
the hierarchical organization of chromatin, which reflects its diverse biophysical principles …
Shaping gene expression and its evolution by chromatin architecture and enhancer activity.
J Mañes-García, R Marco-Ferreres… - Current Topics in …, 2024 - europepmc.org
Transcriptional regulation plays a pivotal role in orchestrating the intricate genetic programs
governing embryonic development. The expression of developmental genes relies on the …
governing embryonic development. The expression of developmental genes relies on the …