The roles and implications of RNA m6A modification in cancer

X Deng, Y Qing, D Horne, H Huang… - Nature Reviews Clinical …, 2023 - nature.com
Abstract N 6-Methyladenosine (m6A), the most prevalent internal modification in eukaryotic
mRNA, has been extensively and increasingly studied over the past decade. Dysregulation …

Mapping epigenetic modifications by sequencing technologies

X Chen, H Xu, X Shu, CX Song - Cell Death & Differentiation, 2023 - nature.com
The “epigenetics” concept was first described in 1942. Thus far, chemical modifications on
histones, DNA, and RNA have emerged as three important building blocks of epigenetic …

Small RNA modifications: regulatory molecules and potential applications

Q Xiong, Y Zhang - Journal of Hematology & Oncology, 2023 - Springer
Small RNAs (also referred to as small noncoding RNAs, sncRNA) are defined as polymeric
ribonucleic acid molecules that are less than 200 nucleotides in length and serve a variety of …

Simultaneous nanopore profiling of mRNA m6A and pseudouridine reveals translation coordination

S Huang, AC Wylder, T Pan - Nature Biotechnology, 2024 - nature.com
Abstract N6-methyladenosine (m6A) and pseudouridine (Ψ) are the two most abundant
modifications in mammalian messenger RNA, but the coordination of their biological …

Single-nucleus multiomic mapping of m6A methylomes and transcriptomes in native populations of cells with sn-m6A-CT

K Hamashima, KW Wong, TW Sam, JHJ Teo, R Taneja… - Molecular Cell, 2023 - cell.com
Summary N 6-methyladenosine (m 6 A) RNA modification plays important roles in the
governance of gene expression and is temporally regulated in different cell states. In …

Quantifying m6A and Ψ Modifications in the Transcriptome via Chemical-Assisted Approaches

M Zhang, Y Xiao, Z Jiang, C Yi - Accounts of Chemical Research, 2023 - ACS Publications
Conspectus Since the discovery of the first chemically modified RNA nucleotide in 1951,
more than 170 types of chemical modifications have been characterized in RNA so far …

Base-resolution sequencing methods for whole-transcriptome quantification of mRNA modifications

LS Zhang, Q Dai, C He - Accounts of Chemical Research, 2023 - ACS Publications
Conspectus RNA molecules are not merely a combination of four bases of A, C, G, and U.
Chemical modifications occur in almost all RNA species and play diverse roles in gene …

An adenine base editor variant expands context compatibility

YL Xiao, Y Wu, W Tang - Nature Biotechnology, 2024 - nature.com
Adenine base editors (ABEs) are precise gene-editing agents that convert A: T pairs into G:
C through a deoxyinosine intermediate. Existing ABEs function most effectively when the …

The rise of epitranscriptomics: recent developments and future directions

J Cerneckis, GL Ming, H Song, C He, Y Shi - Trends in Pharmacological …, 2024 - cell.com
The epitranscriptomics field has undergone tremendous growth since the discovery that the
RNA N 6-methyladenosine (m 6 A) modification is reversible and is distributed throughout …

Enhancing clinical potential of liquid biopsy through a multi-omic approach: A systematic review

G Di Sario, V Rossella, ES Famulari, A Maurizio… - Frontiers in …, 2023 - frontiersin.org
In the last years, liquid biopsy gained increasing clinical relevance for detecting and
monitoring several cancer types, being minimally invasive, highly informative and replicable …