Co-evolution and co-speciation of host-gut bacteria systems

M Groussin, F Mazel, EJ Alm - Cell Host & Microbe, 2020 - cell.com
Mammalian gut microbiomes profoundly influence host fitness, but the processes that drive
the evolution of host-microbiome systems are poorly understood. Recent studies suggest …

Cospeciation vs host‐shift speciation: Methods for testing, evidence from natural associations and relation to coevolution

DM De Vienne, G Refrégier… - New …, 2013 - Wiley Online Library
Hosts and their symbionts are involved in intimate physiological and ecological interactions.
The impact of these interactions on the evolution of each partner depends on the time‐scale …

Codiversification of gut microbiota with humans

TA Suzuki, JL Fitzstevens, VT Schmidt, H Enav… - Science, 2022 - science.org
The gut microbiomes of human populations worldwide have many core microbial species in
common. However, within a species, some strains can show remarkable population …

Symbioses shape feeding niches and diversification across insects

CK Cornwallis, A van't Padje, J Ellers, M Klein… - Nature ecology & …, 2023 - nature.com
For over 300 million years, insects have relied on symbiotic microbes for nutrition and
defence. However, it is unclear whether specific ecological conditions have repeatedly …

Relationships between phyllosphere bacterial communities and plant functional traits in a neotropical forest

SW Kembel, TK O'Connor, HK Arnold… - Proceedings of the …, 2014 - National Acad Sciences
The phyllosphere—the aerial surfaces of plants, including leaves—is a ubiquitous global
habitat that harbors diverse bacterial communities. Phyllosphere bacterial communities have …

Co-diversification of an intestinal Mycoplasma and its salmonid host

JA Rasmussen, P Kiilerich, AS Madhun… - The ISME …, 2023 - academic.oup.com
Understanding the evolutionary relationships between a host and its intestinal resident
bacteria can transform how we understand adaptive phenotypic traits. The interplay between …

SeqinR 1.0-2: a contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis

D Charif, JR Lobry - Structural approaches to sequence evolution …, 2007 - Springer
The seqinR package for the R environment is a library of utilities to retrieve and analyze
biological sequences. It provides an interface between:(i) the R language and environment …

An extreme case of plant–insect codiversification: figs and fig-pollinating wasps

A Cruaud, N Rønsted, B Chantarasuwan… - Systematic …, 2012 - academic.oup.com
It is thought that speciation in phytophagous insects is often due to colonization of novel host
plants, because radiations of plant and insect lineages are typically asynchronous. Recent …

Testing the species traits–environment relationships: the fourth‐corner problem revisited

S Dray, P Legendre - Ecology, 2008 - Wiley Online Library
Functional ecology aims at determining the relationships between species traits and
environmental variables in order to better understand biological processes in ecosystems …

Advances and trends in the molecular systematics of anisakid nematodes, with implications for their evolutionary ecology and host—parasite co-evolutionary …

S Mattiucci, G Nascetti - Advances in parasitology, 2008 - Elsevier
The application of molecular systematics to the anisakid nematodes of the genera Anisakis,
Pseudoterranova and Contracaecum, parasites of aquatic organisms, over the last two …