Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

Mycobiome diversity: high-throughput sequencing and identification of fungi

RH Nilsson, S Anslan, M Bahram… - Nature Reviews …, 2019 - nature.com
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …

Structure and function of the global topsoil microbiome

M Bahram, F Hildebrand, SK Forslund, JL Anderson… - Nature, 2018 - nature.com
Soils harbour some of the most diverse microbiomes on Earth and are essential for both
nutrient cycling and carbon storage. To understand soil functioning, it is necessary to model …

Embracing the unknown: disentangling the complexities of the soil microbiome

N Fierer - Nature Reviews Microbiology, 2017 - nature.com
Soil microorganisms are clearly a key component of both natural and managed ecosystems.
Despite the challenges of surviving in soil, a gram of soil can contain thousands of individual …

Fungal biodiversity and their role in soil health

M Frąc, SE Hannula, M Bełka, M Jędryczka - Frontiers in microbiology, 2018 - frontiersin.org
Soil health, and the closely related terms of soil quality and fertility, is considered as one of
the most important characteristics of soil ecosystems. The integrated approach to soil health …

Forest soil bacteria: diversity, involvement in ecosystem processes, and response to global change

S Lladó, R López-Mondéjar… - … and Molecular Biology …, 2017 - Am Soc Microbiol
The ecology of forest soils is an important field of research due to the role of forests as
carbon sinks. Consequently, a significant amount of information has been accumulated …

Unveiling the crucial role of soil microorganisms in carbon cycling: A review

H Wu, H Cui, C Fu, R Li, F Qi, Z Liu, G Yang… - Science of The Total …, 2023 - Elsevier
Soil microorganisms, by actively participating in the decomposition and transformation of
organic matter through diverse metabolic pathways, play a pivotal role in carbon cycling …

Forest microbiome: diversity, complexity and dynamics

P Baldrian - FEMS Microbiology reviews, 2017 - academic.oup.com
Globally, forests represent highly productive ecosystems that act as carbon sinks where soil
organic matter is formed from residuals after biomass decomposition as well as from …

The role of microbial community in the decomposition of leaf litter and deadwood

A Bani, S Pioli, M Ventura, P Panzacchi, L Borruso… - Applied soil ecology, 2018 - Elsevier
Leaf litter and deadwood have important roles in the forest ecosystems, providing shelter for
several organisms, preventing erosion and microclimate fluctuations. Their decomposition is …

Effects of environmental factors on the microbial community changes during medium-high temperature Daqu manufacturing

M Zhu, J Zheng, J Xie, D Zhao, ZW Qiao… - Food Research …, 2022 - Elsevier
Environmental factors and microbial interaction influence the changes in microbial
community and enzyme profiles during different stages of medium-high temperature Daqu …