Whole-genome duplication and plant macroevolution

JW Clark, PCJ Donoghue - Trends in plant science, 2018 - cell.com
Whole-genome duplication (WGD) is characteristic of almost all fundamental lineages of
land plants. Unfortunately, the timings of WGD events are loosely constrained and …

Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines

JA Birchler, RA Veitia - … of the National Academy of Sciences, 2012 - National Acad Sciences
We summarize, in this review, the evidence that genomic balance influences gene
expression, quantitative traits, dosage compensation, aneuploid syndromes, population …

The multiple fates of gene duplications: deletion, hypofunctionalization, subfunctionalization, neofunctionalization, dosage balance constraints, and neutral variation

JA Birchler, H Yang - The Plant Cell, 2022 - academic.oup.com
Gene duplications have long been recognized as a contributor to the evolution of genes with
new functions. Multiple copies of genes can result from tandem duplication, from …

Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome

F He, R Pasam, F Shi, S Kant, G Keeble-Gagnere… - Nature …, 2019 - nature.com
Introgression is a potential source of beneficial genetic diversity. The contribution of
introgression to adaptive evolution and improvement of wheat as it was disseminated …

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

A D'hont, F Denoeud, JM Aury, FC Baurens, F Carreel… - Nature, 2012 - nature.com
Abstract Bananas (Musa spp.), including dessert and cooking types, are giant perennial
monocotyledonous herbs of the order Zingiberales, a sister group to the well-studied Poales …

Gene duplication and evolutionary novelty in plants

LE Flagel, JF Wendel - New Phytologist, 2009 - Wiley Online Library
Duplication is a prominent feature of plant genomic architecture. This has led many
researchers to speculate that gene duplication may have played an important role in the …

Heterosis

JA Birchler, H Yao, S Chudalayandi, D Vaiman… - The Plant …, 2010 - academic.oup.com
Heterosis refers to the phenomenon that progeny of diverse varieties of a species or crosses
between species exhibit greater biomass, speed of development, and fertility than both …

Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition

M Freeling - Annual review of plant biology, 2009 - annualreviews.org
Each mode of gene duplication (tandem, tetraploid, segmental, transpositional) retains
genes in a biased manner. A reciprocal relationship exists between plant genes retained …

The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato

U Krieger, ZB Lippman, D Zamir - Nature genetics, 2010 - nature.com
Intercrossing different varieties of plants frequently produces hybrid offspring with superior
vigor and increased yields, in a poorly understood phenomenon known as heterosis,. One …

Quantitative nature of overexpression experiments

H Moriya - Molecular biology of the cell, 2015 - Am Soc Cell Biol
Overexpression experiments are sometimes considered as qualitative experiments
designed to identify novel proteins and study their function. However, in order to draw …