[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

Three hundred ways to assess Europe's surface waters: an almost complete overview of biological methods to implement the Water Framework Directive

S Birk, W Bonne, A Borja, S Brucet, A Courrat… - Ecological …, 2012 - Elsevier
According to the Water Framework Directive (WFD), the status of European surface waters is
assessed using aquatic organism groups. Here we present an overview of 297 assessment …

Quantified biotic and abiotic responses to multiple stress in freshwater, marine and ground waters

P Nõges, C Argillier, Á Borja, JM Garmendia… - Science of the Total …, 2016 - Elsevier
We reviewed 219 papers and built an inventory of 532 items of ecological evidence on
multiple stressor impacts in rivers, lakes, transitional and coastal waters, as well as …

The importance of setting targets and reference conditions in assessing marine ecosystem quality

Á Borja, DM Dauer, A Grémare - Ecological Indicators, 2012 - Elsevier
Assessing benthic quality status of marine and transitional water habitats requires to set up
both:(i) tools (ie indices) to assess the relative quality of the considered habitat, and (ii) …

[HTML][HTML] European aquatic ecological assessment methods: A critical review of their sensitivity to key pressures

S Poikane, FS Herrero, MG Kelly, A Borja, S Birk… - Science of the Total …, 2020 - Elsevier
Abstract The European Union has embarked on a policy which aims to achieve good
ecological status in all surface waters (ie rivers, lakes, transitional and coastal waters). In …

Foram-AMBI: A sensitivity index based on benthic foraminiferal faunas from North-East Atlantic and Arctic fjords, continental shelves and slopes

E Alve, S Korsun, J Schönfeld, N Dijkstra… - Marine …, 2016 - Elsevier
The present study follows up the FOraminiferal BIo-MOnitoring (FOBIMO) working group's
aim to explore methods which will improve the usefulness of benthic foraminifera in …

Integrating ecological, economic and social aspects to generate useful management information under the EU Directives''ecosystem approach'

VN De Jonge, R Pinto, RK Turner - Ocean & Coastal Management, 2012 - Elsevier
If we as scientists cannot decide upon what research, monitoring and technical tools should
be used as a basis for policy making and management within the European context, then the …

Is there a possibility of ranking benthic quality assessment indices to select the most responsive to different human pressures?

Á Borja, SL Marín, I Muxika, L Pino… - Marine Pollution Bulletin, 2015 - Elsevier
Although a plethora of benthic indices exist, there is no agreement on what index or indices
should be used by environmental managers to establish benthic quality. The objective of this …

Cumulative effects assessment: theoretical underpinnings and big problems

FC Jones - Environmental Reviews, 2016 - cdnsciencepub.com
Cumulative effects assessment (CEA) is a sub-discipline of environmental impact
assessment that is concerned with appraising the collective effects of human activities and …

[HTML][HTML] Assessing marine ecosystem condition: A review to support indicator choice and framework development

KP Smit, ATF Bernard, AT Lombard, KJ Sink - Ecological Indicators, 2021 - Elsevier
This review provides a broad conceptual overview of different approaches to measuring
marine ecosystem condition and guidance for framework development (particularly relevant …