A systemic approach to explore the mechanisms of drug resistance and altered signaling cascades in extensively drug-resistant tuberculosis

SU Kumar, A Saleem, DT Kumar, VA Preethi… - Advances in protein …, 2021 - Elsevier
Background and aim: The persistence of extensively drug-resistant (XDR) strains of
Mycobacterium tuberculosis (MTB) continue to pose a significant challenge to the treatment …

The role of the X chromosome in infectious diseases

M Hay, V Kumar, I Ricaño-Ponce - Briefings in functional …, 2022 - academic.oup.com
Many infectious diseases in humans present with a sex bias. This bias arises from a
combination of environmental factors, hormones and genetics. In this study, we review the …

Prediction of anti-tuberculosis treatment duration based on a 22-gene transcriptomic model

J Heyckendorf, S Marwitz, M Reimann… - European respiratory …, 2021 - Eur Respiratory Soc
Background The World Health Organization recommends standardised treatment durations
for patients with tuberculosis (TB). We identified and validated a host-RNA signature as a …

Transcriptional profiling and deriving a seven-gene signature that discriminates active and latent tuberculosis: an integrative bioinformatics approach

S Natarajan, M Ranganathan, LE Hanna, S Tripathy - Genes, 2022 - mdpi.com
Tuberculosis (TB) is an infectious disease caused by Mycobacterium tuberculosis (M. tb.).
Our integrative analysis aims to identify the transcriptional profiling and gene expression …

[HTML][HTML] Identification of key proteins in host–pathogen interactions between Mycobacterium tuberculosis and Homo sapiens: A systematic network theoretical …

RN Verma, MZ Malik, GP Singh, N Subbarao - Healthcare Analytics, 2022 - Elsevier
Tuberculosis (TB) is an infectious disease caused primarily by the bacterial pathogen
Mycobacterium tuberculosis (Mtb) in humans. The emergence of various drug-resistant Mtb …

An integrative network approach to identify common genes for the therapeutics in tuberculosis and its overlapping non-communicable diseases

A Alam, H Abubaker Bagabir, A Sultan… - Frontiers in …, 2022 - frontiersin.org
Tuberculosis (TB) is the leading cause of death from a single infectious agent. The estimated
total global TB deaths in 2019 were 1.4 million. The decline in TB incidence rate is very …

Curation of over 10 000 transcriptomic studies to enable data reuse

N Lim, S Tesar, M Belmadani, G Poirier-Morency… - Database, 2021 - academic.oup.com
Vast amounts of transcriptomic data reside in public repositories, but effective reuse remains
challenging. Issues include unstructured dataset metadata, inconsistent data processing …

System-wide identification of myeloid markers of TB disease and HIV-induced reactivation in the macaque model of Mtb infection and Mtb/SIV co-infection

M Gough, DK Singh, B Singh, D Kaushal… - Frontiers in …, 2022 - frontiersin.org
Mycobacterium tuberculosis (Mtb) has developed specialized mechanisms to parasitize its
host cell, the macrophage. These mechanisms allow it to overcome killing by oxidative burst …

In-depth systems biological evaluation of bovine alveolar macrophages suggests novel insights into molecular mechanisms underlying Mycobacterium bovis infection

A Hasankhani, A Bahrami, S Mackie… - Frontiers in …, 2022 - frontiersin.org
Objective Bovine tuberculosis (bTB) is a chronic respiratory infectious disease of domestic
livestock caused by intracellular Mycobacterium bovis infection, which causes~ $3 billion in …

Detection of microRNAs expression signatures in vitreous humor of intraocular tuberculosis

S Chadalawada, SR Rathinam, P Lalitha… - Molecular Biology …, 2023 - Springer
Background MicroRNA (miRNA) expression analysis has been shown to provide them as
biomarkers in several eye diseases and has a regulatory role in pathogenesis. However …