Chloroplast DNA systematics: a review of methods and data analysis

RG Olmstead, JD Palmer - American journal of botany, 1994 - Wiley Online Library
The field of plant molecular systematics is expanding rapidly, and with it new and refined
methods are coming into use. This paper reviews recent advances in experimental methods …

Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)

T Sang, DJ Crawford, TF Stuessy - American journal of Botany, 1997 - Wiley Online Library
The coding region of the matK gene and two intergenic spacers, psbA‐trnH and trnL (UAA)‐
trnF (GAA), of cpDNA were sequenced to study phylogenetic relationships of 32 Paeonia …

The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis

J Shaw, EB Lickey, JT Beck, SB Farmer… - American journal of …, 2005 - Wiley Online Library
Chloroplast DNA sequences are a primary source of data for plant molecular systematic
studies. A few key papers have provided the molecular systematics community with …

[图书][B] Flowering plants

A Takhtajan - 2009 - Springer
Friedman WE, RC Moore, and MD Purugganan. 2004. The evolution of plant development.
Am. J. Bot. 91: 1726–1741. Friis EM, PR Crane, and KP Pedersen. 1997. Fossil history of …

Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary

M Lavin, PS Herendeen… - Systematic biology, 2005 - academic.oup.com
Tertiary macrofossils of the flowering plant family Leguminosae (legumes) were used as
time constraints to estimate ages of the earliest branching clades identified in separate …

A phylogeny of legumes (Leguminosae) based on analysis of the plastid matK gene resolves many well‐supported subclades within the family

MF Wojciechowski, M Lavin… - American journal of …, 2004 - Wiley Online Library
Phylogenetic analysis of 330 plastid matK gene sequences, representing 235 genera from
37 of 39 tribes, and four outgroup taxa from eurosids I supports many well‐resolved …

The phylogeny and a new classification of the gingers (Zingiberaceae): evidence from molecular data

WJ Kress, LM Prince, KJ Williams - American Journal of Botany, 2002 - Wiley Online Library
The pantropical Zingiberaceae is the largest family in the order Zingiberales with 53 genera
and over 1200 species. Classifications of the family first proposed in 1889 and refined by …

Chloroplast DNA sequence utility for the lowest phylogenetic and phylogeographic inferences in angiosperms: the tortoise and the hare IV

J Shaw, HL Shafer, OR Leonard… - American Journal of …, 2014 - Wiley Online Library
• Premise of the study: Noncoding chloroplast DNA (NC‐cpDNA) sequences are the staple
data source of low‐level phylogeographic and phylogenetic studies of angiosperms. We …

Phylogenetic incongruence: window into genome history and molecular evolution

JF Wendel, JJ Doyle - Molecular systematics of plants II: DNA sequencing, 1998 - Springer
The field of systematic biology has been revitalized and transformed during the last few
decades by the confluence of phylogenetic thinking with ready access to the tools of …

The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group

RL Small, JA Ryburn, RC Cronn… - American journal of …, 1998 - Wiley Online Library
Phylogenetic resolution is often low within groups of recently diverged taxa due to a paucity
of phylogenetically informative characters. We tested the relative utility of seven noncoding …