Phage diversity, genomics and phylogeny

MB Dion, F Oechslin, S Moineau - Nature Reviews Microbiology, 2020 - nature.com
Recent advances in viral metagenomics have enabled the rapid discovery of an
unprecedented catalogue of phages in numerous environments, from the human gut to the …

Extracellular vesicles, tunneling nanotubes, and cellular interplay: synergies and missing links

M Nawaz, F Fatima - Frontiers in molecular biosciences, 2017 - frontiersin.org
The process of intercellular communication seems to have been a highly conserved
evolutionary process. Higher eukaryotes use several means of intercellular communication …

A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria

KM Kauffman, FA Hussain, J Yang, P Arevalo… - Nature, 2018 - nature.com
The most abundant viruses on Earth are thought to be double-stranded DNA (dsDNA)
viruses that infect bacteria. However, tailed bacterial dsDNA viruses (Caudovirales), which …

Nanotube‐like processes facilitate material transfer between photoreceptors

AA Kalargyrou, M Basche, A Hare, EL West… - EMBO …, 2021 - embopress.org
Neuronal communication is typically mediated via synapses and gap junctions. New forms
of intercellular communication, including nanotubes (NTs) and extracellular vesicles (EVs) …

Specialized intercellular communications via cytonemes and nanotubes

YM Yamashita, M Inaba… - Annual review of cell and …, 2018 - annualreviews.org
In recent years, thin membrane protrusions such as cytonemes and tunneling nanotubes
have emerged as a novel mechanism of intercellular communication. Protrusion-based …

[PDF][PDF] Single-particle imaging without symmetry constraints at an X-ray free-electron laser

M Rose, S Bobkov, K Ayyer, RP Kurta, D Dzhigaev… - IUCrJ, 2018 - journals.iucr.org
The analysis of a single-particle imaging (SPI) experiment performed at the AMO beamline
at LCLS as part of the SPI initiative is presented here. A workflow for the three-dimensional …

Megataxonomy and global ecology of the virosphere

EV Koonin, JH Kuhn, VV Dolja, M Krupovic - The ISME Journal, 2024 - academic.oup.com
Nearly all organisms are hosts to multiple viruses that collectively appear to be the most
abundant biological entities in the biosphere. With recent advances in metagenomics and …

Dynamo Catalogue: Geometrical tools and data management for particle picking in subtomogram averaging of cryo-electron tomograms

D Castaño-Díez, M Kudryashev, H Stahlberg - Journal of structural biology, 2017 - Elsevier
Cryo electron tomography allows macromolecular complexes within vitrified, intact, thin cells
or sections thereof to be visualized, and structural analysis to be performed in situ by …

Archaeal viruses and bacteriophages: comparisons and contrasts

MK Pietilä, TA Demina, NS Atanasova… - Trends in …, 2014 - cell.com
Isolated archaeal viruses comprise only a few percent of all known prokaryotic viruses. Thus,
the study of viruses infecting archaea is still in its early stages. Here we summarize the most …

Emerging physiological and pathological implications of tunneling nanotubes formation between cells

S Sisakhtnezhad, L Khosravi - European journal of cell biology, 2015 - Elsevier
Cell-to-cell communication is a critical requirement to coordinate behaviors of the cells in a
community and thereby achieve tissue homeostasis and conservation of the multicellular …