The SET-domain protein superfamily: protein lysine methyltransferases

SC Dillon, X Zhang, RC Trievel, X Cheng - Genome biology, 2005 - Springer
The SET-domain protein superfamily: protein lysine methyltransferases | Genome Biology Skip
to main content SpringerLink Account Menu Find a journal Publish with us Track your research …

Mechanisms of site-specific recombination

NDF Grindley, KL Whiteson, PA Rice - Annu. Rev. Biochem., 2006 - annualreviews.org
Integration, excision, and inversion of defined DNA segments commonly occur through site-
specific recombination, a process of DNA breakage and reunion that requires no DNA …

Fat mobilization in adipose tissue is promoted by adipose triglyceride lipase

R Zimmermann, JG Strauss, G Haemmerle… - Science, 2004 - science.org
Mobilization of fatty acids from triglyceride stores in adipose tissue requires lipolytic
enzymes. Dysfunctional lipolysis affects energy homeostasis and may contribute to the …

The evolution of vertebrate Toll-like receptors

JC Roach, G Glusman, L Rowen… - Proceedings of the …, 2005 - National Acad Sciences
The complete sequences of Takifugu Toll-like receptor (TLR) loci and gene predictions from
many draft genomes enable comprehensive molecular phylogenetic analysis. Strong …

Using OrthoMCL to assign proteins to OrthoMCL‐DB groups or to cluster proteomes into new ortholog groups

S Fischer, BP Brunk, F Chen, X Gao… - Current protocols in …, 2011 - Wiley Online Library
OrthoMCL is an algorithm for grouping proteins into ortholog groups based on their
sequence similarity. OrthoMCL‐DB is a public database that allows users to browse and …

Zinc through the three domains of life

C Andreini, L Banci, I Bertini… - Journal of proteome …, 2006 - ACS Publications
Zinc is one of the metal ions essential for life, as it is required for the proper functioning of a
large number of proteins. Despite its importance, the annotation of zinc-binding proteins in …

Sequence and structural analysis of BTB domain proteins

PJ Stogios, GS Downs, JJS Jauhal, SK Nandra… - Genome biology, 2005 - Springer
Background The BTB domain (also known as the POZ domain) is a versatile protein-protein
interaction motif that participates in a wide range of cellular functions, including …

Systematic analysis and nomenclature of mammalian F-box proteins

J Jin, T Cardozo, RC Lovering, SJ Elledge… - Genes & …, 2004 - genesdev.cshlp.org
Much of the targeted protein ubiquitylation that occurs in eukaryotes is performed by cullin-
based E3 ubiquitin ligases, which form a superfamily of modular E3s. The best understood …

Genomic analysis of regulatory network dynamics reveals large topological changes

NM Luscombe, M Madan Babu, H Yu, M Snyder… - Nature, 2004 - nature.com
Network analysis has been applied widely, providing a unifying language to describe
disparate systems ranging from social interactions to power grids. It has recently been used …

CDD: a Conserved Domain Database for protein classification

A Marchler-Bauer, JB Anderson… - Nucleic acids …, 2005 - academic.oup.com
Abstract The Conserved Domain Database (CDD) is the protein classification component of
NCBI's Entrez query and retrieval system. CDD is linked to other Entrez databases such as …