Complex networks: Structure and dynamics

S Boccaletti, V Latora, Y Moreno, M Chavez… - Physics reports, 2006 - Elsevier
Coupled biological and chemical systems, neural networks, social interacting species, the
Internet and the World Wide Web, are only a few examples of systems composed by a large …

Network biology: understanding the cell's functional organization

AL Barabasi, ZN Oltvai - Nature reviews genetics, 2004 - nature.com
A key aim of postgenomic biomedical research is to systematically catalogue all molecules
and their interactions within a living cell. There is a clear need to understand how these …

Atypical combinations and scientific impact

B Uzzi, S Mukherjee, M Stringer, B Jones - Science, 2013 - science.org
Novelty is an essential feature of creative ideas, yet the building blocks of new ideas are
often embodied in existing knowledge. From this perspective, balancing atypical knowledge …

Meta-research: evaluation and improvement of research methods and practices

JPA Ioannidis, D Fanelli, DD Dunne, SN Goodman - PLoS biology, 2015 - journals.plos.org
As the scientific enterprise has grown in size and diversity, we need empirical evidence on
the research process to test and apply interventions that make it more efficient and its results …

Community detection algorithms: a comparative analysis

A Lancichinetti, S Fortunato - Physical Review E—Statistical, Nonlinear, and …, 2009 - APS
Uncovering the community structure exhibited by real networks is a crucial step toward an
understanding of complex systems that goes beyond the local organization of their …

[图书][B] Complex networks: structure, robustness and function

R Cohen, S Havlin - 2010 - books.google.com
Examining important results and analytical techniques, this graduate-level textbook is a step-
by-step presentation of the structure and function of complex networks. Using a range of …

[图书][B] An introduction to systems biology: design principles of biological circuits

U Alon - 2019 - api.taylorfrancis.com
Praise for the first edition:… superb, beautifully written and organized work that takes an
engineering approach to systems biology. Alon provides nicely written appendices to …

Configuring random graph models with fixed degree sequences

BK Fosdick, DB Larremore, J Nishimura, J Ugander - Siam Review, 2018 - SIAM
Random graph null models have found widespread application in diverse research
communities analyzing network datasets, including social, information, and economic …

Structural Properties of the Caenorhabditis elegans Neuronal Network

LR Varshney, BL Chen, E Paniagua… - PLoS computational …, 2011 - journals.plos.org
Despite recent interest in reconstructing neuronal networks, complete wiring diagrams on
the level of individual synapses remain scarce and the insights into function they can …

Spontaneous evolution of modularity and network motifs

N Kashtan, U Alon - … of the National Academy of Sciences, 2005 - National Acad Sciences
Biological networks have an inherent simplicity: they are modular with a design that can be
separated into units that perform almost independently. Furthermore, they show reuse of …