Genome‐wide association and genomic selection in aquaculture

JM Yanez, A Barria, ME Lopez, T Moen… - Reviews in …, 2023 - Wiley Online Library
Recent advancements in genomic technologies have led to the discovery and application of
DNA‐markers [eg single nucleotide polymorphisms (SNPs)] for the genetic improvement of …

Research advances in the genomics and applications for molecular breeding of aquaculture animals

X You, X Shan, Q Shi - Aquaculture, 2020 - Elsevier
High-throughput sequencing technologies have been extensively applied to genetics and
breeding in the aquaculture industry. To date, many aquaculture animal genomes have …

Genetic and epigenetic regulation of growth, reproduction, disease resistance and stress responses in aquaculture

Z Liu, T Zhou, D Gao - Frontiers in Genetics, 2022 - frontiersin.org
Major progress has been made with genomic and genetic studies in aquaculture in the last
decade. However, research on epigenetic regulation of aquaculture traits is still at an early …

Development of genomic predictions for harvest and carcass weight in channel catfish

ALS Garcia, B Bosworth, G Waldbieser, I Misztal… - Genetics Selection …, 2018 - Springer
Background Catfish farming is the largest segment of US aquaculture and research is
ongoing to improve production efficiency, including genetic selection programs to improve …

Multi-trait GWAS using imputed high-density genotypes from whole-genome sequencing identifies genes associated with body traits in Nile tilapia

GM Yoshida, JM Yáñez - BMC genomics, 2021 - Springer
Background Body traits are generally controlled by several genes in vertebrates (ie
polygenes), which in turn make them difficult to identify through association mapping …

Increased accuracy of genomic predictions for growth under chronic thermal stress in rainbow trout by prioritizing variants from GWAS using imputed sequence data

GM Yoshida, JM Yáñez - Evolutionary applications, 2022 - Wiley Online Library
Through imputation of genotypes, genome‐wide association study (GWAS) and genomic
prediction (GP) using whole‐genome sequencing (WGS) data are cost‐efficient and feasible …

A genome-wide association study of heat tolerance in Pacific abalone based on genome resequencing

F Yu, W Peng, B Tang, Y Zhang, YI Wang, Y Gan… - Aquaculture, 2021 - Elsevier
China produces nearly 90% of the world's abalone. The Pacific abalone, Haliotis discus
hannai, is the main cultured species. Because of the southward migration to subtropical …

Thiamethoxam at sublethal concentrations induces histopathological, serum biochemical alterations and DNA damage in fish (Labeo rohita)

R Hussain, A Ghaffar, G Abbas, G Jabeen, I Khan… - Toxin …, 2022 - Taylor & Francis
The effects of thiamethoxam neonictinoids insecticide (TMX) commonly used in different
food crops and in veterinary practice were evaluated in freshwater fish exposed to sublethal …

Genome-wide identification of loci associated with growth in rainbow trout

A Ali, R Al-Tobasei, D Lourenco, T Leeds, B Kenney… - BMC genomics, 2020 - Springer
Background Growth is a major economic production trait in aquaculture. Improvements in
growth performance will reduce time and cost for fish to reach market size. However, genes …

Genome-wide association analysis for body weight identifies candidate genes related to development and metabolism in rainbow trout (Oncorhynchus mykiss)

RV Reis Neto, GM Yoshida, JP Lhorente… - Molecular Genetics and …, 2019 - Springer
Growth is one of the most important traits from both a physiological and economic
perspective in aquaculture species. Thus, identifying the genomic regions and genes …