The role of chromatin loop extrusion in antibody diversification

Y Zhang, X Zhang, HQ Dai, H Hu, FW Alt - Nature Reviews Immunology, 2022 - nature.com
Cohesin mediates chromatin loop formation across the genome by extruding chromatin
between convergently oriented CTCF-binding elements. Recent studies indicate that …

V (D) J recombination: mechanisms of initiation

DG Schatz, PC Swanson - Annual review of genetics, 2011 - annualreviews.org
V (D) J recombination assembles immunoglobulin and T cell receptor genes during
lymphocyte development through a series of carefully orchestrated DNA breakage and …

Epigenetic regulation and T-cell responses in endometriosis–something other than autoimmunity

D Szukiewicz - Frontiers in immunology, 2022 - frontiersin.org
Endometriosis is defined as the presence of endometrial-like glands and stroma located
outside the uterine cavity. This common, estrogen dependent, inflammatory condition affects …

[HTML][HTML] The in vivo pattern of binding of RAG1 and RAG2 to antigen receptor loci

Y Ji, W Resch, E Corbett, A Yamane, R Casellas… - Cell, 2010 - cell.com
The critical initial step in V (D) J recombination, binding of RAG1 and RAG2 to
recombination signal sequences flanking antigen receptor V, D, and J gene segments, has …

Chromosomal loop domains direct the recombination of antigen receptor genes

J Hu, Y Zhang, L Zhao, RL Frock, Z Du, RM Meyers… - Cell, 2015 - cell.com
Summary RAG initiates antibody V (D) J recombination in developing lymphocytes by
generating" on-target" DNA breaks at matched pairs of bona fide recombination signal …

[HTML][HTML] RAG represents a widespread threat to the lymphocyte genome

G Teng, Y Maman, W Resch, M Kim, A Yamane, J Qian… - Cell, 2015 - cell.com
The RAG1 endonuclease, together with its cofactor RAG2, is essential for V (D) J
recombination but is a potent threat to genome stability. The sources of RAG1 mis-targeting …

Regulation and Evolution of the RAG Recombinase

G Teng, DG Schatz - Advances in immunology, 2015 - Elsevier
The modular, noncontiguous architecture of the antigen receptor genes necessitates their
assembly through V (D) J recombination. This program of DNA breakage and rejoining …

RAG chromatin scanning during V (D) J recombination and chromatin loop extrusion are related processes

SG Lin, Z Ba, FW Alt, Y Zhang - Advances in immunology, 2018 - Elsevier
An effective adaptive immune system depends on the ability of developing B and T cells to
generate diverse immunoglobulin (Ig) and T cell receptor repertoires, respectively. Such …

Locus folding mechanisms determine modes of antigen receptor gene assembly

BM Allyn, KE Hayer, C Oyeniran, V Nganga… - Journal of Experimental …, 2024 - rupress.org
The dynamic folding of genomes regulates numerous biological processes, including
antigen receptor (AgR) gene assembly. We show that, unlike other AgR loci, homotypic …

Peripheral subnuclear positioning suppresses Tcrb recombination and segregates Tcrb alleles from RAG2

EAW Chan, G Teng, E Corbett… - Proceedings of the …, 2013 - National Acad Sciences
Allelic exclusion requires that the two alleles at antigen-receptor loci attempt to recombine
variable (V), diversity (D), and joining (J) gene segments [V (D) J recombination] …