Chemical reaction networks and opportunities for machine learning

M Wen, EWC Spotte-Smith, SM Blau… - Nature Computational …, 2023 - nature.com
Chemical reaction networks (CRNs), defined by sets of species and possible reactions
between them, are widely used to interrogate chemical systems. To capture increasingly …

On neural differential equations

P Kidger - arXiv preprint arXiv:2202.02435, 2022 - arxiv.org
The conjoining of dynamical systems and deep learning has become a topic of great
interest. In particular, neural differential equations (NDEs) demonstrate that neural networks …

Universal differential equations for scientific machine learning

C Rackauckas, Y Ma, J Martensen, C Warner… - arXiv preprint arXiv …, 2020 - arxiv.org
In the context of science, the well-known adage" a picture is worth a thousand words" might
well be" a model is worth a thousand datasets." In this manuscript we introduce the SciML …

[HTML][HTML] Two heads are better than one: current landscape of integrating QSP and machine learning: an ISoP QSP SIG white paper by the working group on the …

T Zhang, IP Androulakis, P Bonate, L Cheng… - … of Pharmacokinetics and …, 2022 - Springer
Quantitative systems pharmacology (QSP) modeling is applied to address essential
questions in drug development, such as the mechanism of action of a therapeutic agent and …

Stiff-pinn: Physics-informed neural network for stiff chemical kinetics

W Ji, W Qiu, Z Shi, S Pan, S Deng - The Journal of Physical …, 2021 - ACS Publications
The recently developed physics-informed neural network (PINN) has achieved success in
many science and engineering disciplines by encoding physics laws into the loss functions …

Artificial intelligence for science in quantum, atomistic, and continuum systems

X Zhang, L Wang, J Helwig, Y Luo, C Fu, Y Xie… - arXiv preprint arXiv …, 2023 - arxiv.org
Advances in artificial intelligence (AI) are fueling a new paradigm of discoveries in natural
sciences. Today, AI has started to advance natural sciences by improving, accelerating, and …

[HTML][HTML] Physics-informed attention-based neural network for hyperbolic partial differential equations: application to the Buckley–Leverett problem

R Rodriguez-Torrado, P Ruiz, L Cueto-Felgueroso… - Scientific reports, 2022 - nature.com
Physics-informed neural networks (PINNs) have enabled significant improvements in
modelling physical processes described by partial differential equations (PDEs) and are in …

Learning stiff chemical kinetics using extended deep neural operators

S Goswami, AD Jagtap, H Babaee, BT Susi… - Computer Methods in …, 2024 - Elsevier
We utilize neural operators to learn the solution propagator for challenging systems of
differential equations that are representative of stiff chemical kinetics. Specifically, we apply …

Effectively modeling time series with simple discrete state spaces

M Zhang, KK Saab, M Poli, T Dao, K Goel… - arXiv preprint arXiv …, 2023 - arxiv.org
Time series modeling is a well-established problem, which often requires that methods (1)
expressively represent complicated dependencies,(2) forecast long horizons, and (3) …

Physics-informed neural networks and functional interpolation for stiff chemical kinetics

M De Florio, E Schiassi, R Furfaro - Chaos: An Interdisciplinary Journal …, 2022 - pubs.aip.org
This work presents a recently developed approach based on physics-informed neural
networks (PINNs) for the solution of initial value problems (IVPs), focusing on stiff chemical …