In Situ Methods, Infrastructures, and Applications on High Performance Computing Platforms

AC Bauer, H Abbasi, J Ahrens, H Childs… - Computer Graphics …, 2016 - Wiley Online Library
The considerable interest in the high performance computing (HPC) community regarding
analyzing and visualization data without first writing to disk, ie, in situ processing, is due to …

Computing just what you need: Online data analysis and reduction at extreme scales

I Foster, M Ainsworth, B Allen, J Bessac… - Euro-Par 2017: Parallel …, 2017 - Springer
A growing disparity between supercomputer computation speeds and I/O rates makes it
increasingly infeasible for applications to save all results for offline analysis. Instead …

Identifying challenges and opportunities of in-memory computing on large HPC systems

D Huang, Z Qin, Q Liu, N Podhorszki… - Journal of Parallel and …, 2022 - Elsevier
With the increasing fidelity and resolution enabled by high-performance computing systems,
simulation-based scientific discovery is able to model and understand microscopic physical …

Bootstrapping in-situ workflow auto-tuning via combining performance models of component applications

T Shu, Y Guo, J Wozniak, X Ding, I Foster… - Proceedings of the …, 2021 - dl.acm.org
In an in-situ workflow, multiple components such as simulation and analysis applications are
coupled with streaming data transfers. The multiplicity of possible configurations …

Real-time data analysis and autonomous steering of synchrotron light source experiments

T Bicer, D Gursoy, R Kettimuthu… - 2017 IEEE 13th …, 2017 - ieeexplore.ieee.org
Modern scientific instruments, such as detectors at synchrotron light sources, can generate
data at 10s of GB/sec. Current experimental protocols typically process and validate data …

From complex data to clear insights: visualizing molecular dynamics trajectories

H Belghit, M Spivak, M Dauchez, M Baaden… - Frontiers in …, 2024 - frontiersin.org
Advances in simulations, combined with technological developments in high-performance
computing, have made it possible to produce a physically accurate dynamic representation …

Online data analysis and reduction: An important co-design motif for extreme-scale computers

I Foster, M Ainsworth, J Bessac… - … Journal of High …, 2021 - journals.sagepub.com
A growing disparity between supercomputer computation speeds and I/O rates means that it
is rapidly becoming infeasible to analyze supercomputer application output only after that …

Opportunities for cost savings with in-transit visualization

J Kress, M Larsen, J Choi, M Kim, M Wolf… - … Conference, ISC High …, 2020 - Springer
We analyze the opportunities for in-transit visualization to provide cost savings compared to
in-line visualization. We begin by developing a cost model that includes factors related to …

Optimal execution of co-analysis for large-scale molecular dynamics simulations

P Malakar, V Vishwanath, C Knight… - SC'16: Proceedings …, 2016 - ieeexplore.ieee.org
The analysis of scientific simulation data enables scientists to derive insights from their
simulations. This analysis of the simulation output can be performed at the same execution …

An empirical study of activity, popularity, size, testing, and stability in continuous integration

A Gautam, S Vishwasrao… - 2017 IEEE/ACM 14th …, 2017 - ieeexplore.ieee.org
A good understanding of the practices followed by software development projects can
positively impact their success-particularly for attracting talent and on-boarding new …