[HTML][HTML] Mechanisms of gene duplication and amplification

AB Reams, JR Roth - Cold Spring Harbor perspectives …, 2015 - cshperspectives.cshlp.org
Abstract Changes in gene copy number are among the most frequent mutational events in
all genomes and were among the mutations for which a physical basis was first known. Yet …

Bacterial gene amplification: implications for the evolution of antibiotic resistance

L Sandegren, DI Andersson - Nature Reviews Microbiology, 2009 - nature.com
Recent data suggest that, in response to the presence of antibiotics, gene duplication and
amplification (GDA) constitutes an important adaptive mechanism in bacteria. For example …

Genome Sequence of the PCE-Dechlorinating Bacterium Dehalococcoides ethenogenes

R Seshadri, L Adrian, DE Fouts, JA Eisen, AM Phillippy… - Science, 2005 - science.org
Dehalococcoides ethenogenes is the only bacterium known to reductively dechlorinate the
groundwater pollutants, tetrachloroethene (PCE) and trichloroethene, to ethene. Its …

Gene amplification and adaptive evolution in bacteria

DI Andersson, D Hughes - Annual review of genetics, 2009 - annualreviews.org
Gene duplication-amplification (GDA) processes are highly relevant biologically because
they generate extensive and reversible genetic variation on which adaptive evolution can …

Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species

S Domingues, K Harms, WF Fricke, PJ Johnsen… - 2012 - journals.plos.org
We have investigated to what extent natural transformation acting on free DNA substrates
can facilitate transfer of mobile elements including transposons, integrons and/or gene …

Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition

B Ryall, G Eydallin, T Ferenci - Microbiology and Molecular …, 2012 - Am Soc Microbiol
Diversity in adaptive responses is common within species and populations, especially when
the heterogeneity of the frequently large populations found in environments is considered …

Recurrent gene amplification and soft selective sweeps during evolution of multidrug resistance in malaria parasites

S Nair, D Nash, D Sudimack, A Jaidee… - Molecular biology …, 2007 - academic.oup.com
When selection is strong and beneficial alleles have a single origin, local reductions in
genetic diversity are expected. However, when beneficial alleles have multiple origins or …

Reducing the fitness cost of antibiotic resistance by amplification of initiator tRNA genes

AI Nilsson, A Zorzet, A Kanth… - Proceedings of the …, 2006 - National Acad Sciences
Deformylase inhibitors belong to a novel antibiotic class that targets peptide deformylase, a
bacterial enzyme that removes the formyl group from N-terminal methionine in nascent …

Two different types of tandem sequences mediate the overexpression of TinCYP51B in azole-resistant Trichophyton indotineae

T Yamada, M Maeda, H Nagai, K Salamin… - Antimicrobial Agents …, 2023 - Am Soc Microbiol
Trichophyton indotineae is an emerging dermatophyte that causes severe tinea corporis and
tinea cruris. Numerous cases of terbinafine-and azole-recalcitrant T. indotineae-related …

Y Chromosome of D. pseudoobscura Is Not Homologous to the Ancestral Drosophila Y

AB Carvalho, AG Clark - Science, 2005 - science.org
We report a genome-wide search of Y-linked genes in Drosophila pseudoobscura. All six
identifiable orthologs of the D. melanogaster Y-linked genes have autosomal inheritance in …