Large-scale characterization of drug mechanism of action using proteome-wide thermal shift assays

JG Van Vranken, J Li, J Mintseris, TY Wei, CM Sniezek… - elife, 2024 - elifesciences.org
In response to an ever-increasing demand of new small molecules therapeutics, numerous
chemical and genetic tools have been developed to interrogate compound mechanism of …

Multifaceted proteome analysis at solubility, redox, and expression dimensions for target identification

AA Saei, A Lundin, H Lyu, H Gharibi, H Luo… - Advanced …, 2024 - Wiley Online Library
Multifaceted interrogation of the proteome deepens the system‐wide understanding of
biological systems; however, mapping the redox changes in the proteome has so far been …

Stability-based approaches in chemoproteomics

AL George, ME Dueñas, JL Marín-Rubio… - Expert Reviews in …, 2024 - cambridge.org
Target deconvolution can help understand how compounds exert therapeutic effects and
can accelerate drug discovery by helping optimise safety and efficacy, revealing …

Experimental and data analysis advances in thermal proteome profiling

AM Figueroa-Navedo, AR Ivanov - Cell Reports Methods, 2024 - cell.com
Method development for mass spectrometry (MS)-based thermal shift proteomic assays
have advanced to probe small molecules with known and unknown protein-ligand …

Merging multi-omics with proteome integral solubility alteration unveils antibiotic mode of action

R Maity, X Zhang, FR Liberati, CS Rossi, F Cutruzzolá… - eLife, 2024 - elifesciences.org
Antimicrobial resistance is responsible for an alarming number of deaths, estimated at 5
million per year. To combat priority pathogens, like Helicobacter pylori, the development of …

Improved drug target deconvolution with PISA‐DIA using an extended, overlapping temperature gradient

SJ Emery‐Corbin, JM Yousef, S Adhikari… - …, 2024 - Wiley Online Library
Thermal proteome profiling (TPP) is a powerful tool for drug target deconvolution. Recently,
data‐independent acquisition mass spectrometry (DIA‐MS) approaches have demonstrated …

A DNA Force Circuit for Exploring Protein‐Protein Interactions at the Single‐Molecule Level

K Ma, L Xiong, Z Wang, X Hu, L Qu… - Chinese Journal of …, 2024 - Wiley Online Library
Comprehensive Summary Protein‐protein interactions (PPIs) play a crucial role in drug
discovery and disease treatment. However, the development of effective drugs targeting …

ThermoTargetMiner as a proteome integral solubility alteration target database for prospective drugs against lung cancer

H Lyu, H Gharibi, B Sokolova, A Voiland, B Nilsson… - bioRxiv, 2024 - biorxiv.org
Knowledge of the targets of therapeutic compounds is vital for understanding their action
mechanisms and side effects, but such valuable data is seldom available. The multiple …

Development and Evaluation of Data Analysis Approaches to Increase the Specificity and Performance of Thermal Shift Assays for Assessment of Protein-Small …

AM Figueroa-Navedo - 2023 - search.proquest.com
Thermal proteome profiling effectively investigates protein-protein, protein-nucleic acid, or
protein-drug interactions, and the impact of metabolite binding and post-translational …

[引用][C] CHEMICAL PROTEOMICS IN DRUG DESIGN

RA Zubarev - … Symposium" Bioinformatics and Computer-Aided Drug …, 2023 - elibrary.ru