Epigenetic plasticity and the hallmarks of cancer

WA Flavahan, E Gaskell, BE Bernstein - Science, 2017 - science.org
BACKGROUND Chromatin is the essential medium through which transcription factors,
signaling pathways, and other cues alter gene activity and cellular phenotypes. It assumes …

Advances and promises of epigenetics for forest trees

J Amaral, Z Ribeyre, J Vigneaud, MD Sow, R Fichot… - Forests, 2020 - mdpi.com
The importance of tree genetic variability in the ability of forests to respond and adapt to
environmental changes is crucial in forest management and conservation. Along with …

Decoding the function of bivalent chromatin in development and cancer

D Kumar, S Cinghu, AJ Oldfield, P Yang… - Genome …, 2021 - genome.cshlp.org
Bivalent chromatin is characterized by the simultaneous presence of H3K4me3 and
H3K27me3, histone modifications generally associated with transcriptionally active and …

Generation of human blastocyst-like structures from pluripotent stem cells

Y Fan, Z Min, S Alsolami, Z Ma, E Zhang, W Chen… - Cell discovery, 2021 - nature.com
Human blastocysts are comprised of the first three cell lineages of the embryo:
trophectoderm, epiblast and primitive endoderm, all of which are essential for early …

ChIP-Hub provides an integrative platform for exploring plant regulome

LY Fu, T Zhu, X Zhou, R Yu, Z He, P Zhang… - Nature …, 2022 - nature.com
Plant genomes encode a complex and evolutionary diverse regulatory grammar that forms
the basis for most life on earth. A wealth of regulome and epigenome data have been …

Distinct chromatin signatures in the Arabidopsis male gametophyte

D Zhu, Y Wen, W Yao, H Zheng, S Zhou, Q Zhang… - Nature …, 2023 - nature.com
Epigenetic reprogramming in the germline contributes to the erasure of epigenetic
inheritance across generations in mammals but remains poorly characterized in plants. Here …

Single-cell joint detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions

H Xiong, Y Luo, Q Wang, X Yu, A He - Nature Methods, 2021 - nature.com
Deciphering mechanisms in cell-fate decisions requires single-cell holistic reconstructions of
multidimensional epigenomic states in transcriptional regulation. Here we develop CoTECH …

Endogenous retrovirus-derived enhancers confer the transcriptional regulation of human trophoblast syncytialization

M Yu, X Hu, Z Pan, C Du, J Jiang, W Zheng… - Nucleic Acids …, 2023 - academic.oup.com
Endogenous retroviruses (ERVs) have been proposed as a driving force for the evolution of
the mammalian placenta, however, the contribution of ERVs to placental development and …

Metabolism and epigenetic interplay in cancer: regulation and putative therapeutic targets

V Miranda-Gonçalves, A Lameirinhas… - Frontiers in …, 2018 - frontiersin.org
Alterations in the epigenome and metabolism affect molecular rewiring of cancer cells
facilitating cancer development and progression. Modulation of histone and DNA …

Chromatin remodeler Activity-Dependent Neuroprotective Protein (ADNP) contributes to syndromic autism

CP D'Incal, KE Van Rossem, K De Man, A Konings… - Clinical …, 2023 - Springer
Background Individuals affected with autism often suffer additional co-morbidities such as
intellectual disability. The genes contributing to autism cluster on a relatively limited number …