Microbial diversity in extreme environments

WS Shu, LN Huang - Nature Reviews Microbiology, 2022 - nature.com
A wide array of microorganisms, including many novel, phylogenetically deeply rooted taxa,
survive and thrive in extreme environments. These unique and reduced-complexity …

Tara Oceans: towards global ocean ecosystems biology

S Sunagawa, SG Acinas, P Bork, C Bowler… - Nature Reviews …, 2020 - nature.com
A planetary-scale understanding of the ocean ecosystem, particularly in light of climate
change, is crucial. Here, we review the work of Tara Oceans, an international …

Seasonal dynamics of the microbial community in two full-scale wastewater treatment plants: diversity, composition, phylogenetic group based assembly and co …

C Sun, B Zhang, D Ning, Y Zhang, T Dai, L Wu, T Li… - Water research, 2021 - Elsevier
The optimal operation and functional stability of a wastewater treatment plant (WWTP)
strongly depend on the properties of its microbial community. However, a knowledge gap …

Marine microbial community dynamics and their ecological interpretation

JA Fuhrman, JA Cram, DM Needham - Nature Reviews Microbiology, 2015 - nature.com
Recent advances in studying the dynamics of marine microbial communities have shown
that the composition of these communities follows predictable patterns and involves complex …

Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing

LW Hugerth, AF Andersson - Frontiers in microbiology, 2017 - frontiersin.org
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …

Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus

P Flombaum, JL Gallegos… - Proceedings of the …, 2013 - National Acad Sciences
The Cyanobacteria Prochlorococcus and Synechococcus account for a substantial fraction
of marine primary production. Here, we present quantitative niche models for these lineages …

Fundamentals of microbial community resistance and resilience

A Shade, H Peter, SD Allison, DL Baho… - Frontiers in …, 2012 - frontiersin.org
Microbial communities are at the heart of all ecosystems, and yet microbial community
behavior in disturbed environments remains difficult to measure and predict. Understanding …

Beyond biogeographic patterns: processes shaping the microbial landscape

CA Hanson, JA Fuhrman, MC Horner-Devine… - Nature Reviews …, 2012 - nature.com
Recently, microbiologists have established the existence of biogeographic patterns among a
wide range of microorganisms. The focus of the field is now shifting to identifying the …

Stochastic and deterministic assembly processes in subsurface microbial communities

JC Stegen, X Lin, AE Konopka… - The ISME journal, 2012 - academic.oup.com
A major goal of microbial community ecology is to understand the forces that structure
community composition. Deterministic selection by specific environmental factors is …

Microbial seed banks: the ecological and evolutionary implications of dormancy

JT Lennon, SE Jones - Nature reviews microbiology, 2011 - nature.com
Dormancy is a bet-hedging strategy used by a wide range of taxa, including
microorganisms. It refers to an organism's ability to enter a reversible state of low metabolic …