Deep learning for 3D vascular segmentation in hierarchical phase contrast tomography: a case study on kidney

E Yagis, S Aslani, Y Jain, Y Zhou, S Rahmani… - Scientific Reports, 2024 - nature.com
Automated blood vessel segmentation is critical for biomedical image analysis, as vessel
morphology changes are associated with numerous pathologies. Still, precise segmentation …

Physics-informed neural networks for brain hemodynamic predictions using medical imaging

M Sarabian, H Babaee, K Laksari - IEEE transactions on …, 2022 - ieeexplore.ieee.org
Determining brain hemodynamics plays a critical role in the diagnosis and treatment of
various cerebrovascular diseases. In this work, we put forth a physics-informed deep …

Deep Learning for 3D Vascular Segmentation in Phase Contrast Tomography

E Yagis, S Aslani, Y Jain, Y Zhou, S Rahmani… - Research …, 2024 - pmc.ncbi.nlm.nih.gov
Automated blood vessel segmentation is critical for biomedical image analysis, as vessel
morphology changes are associated with numerous pathologies. Still, precise segmentation …

Brain stroke classification and segmentation using encoder-decoder based deep convolutional neural networks

S Yalçın, H Vural - computers in biology and Medicine, 2022 - Elsevier
Accurate diagnosis of brain stroke, classification and segmentation of the stroke are
extremely important for physicians to focus on specific points of the brain and apply the right …

[HTML][HTML] A dynamic multiscale model of cerebral blood flow and autoregulation in the microvasculature

A Daher, S Payne - Applied Mathematical Modelling, 2023 - Elsevier
Abstract Models of the micro-circulatory blood flow in the brain can play a key role in
understanding the variety of cerebrovascular diseases that occur in the microvasculature …

[HTML][HTML] A network-based model of dynamic cerebral autoregulation

A Daher, S Payne - Microvascular Research, 2023 - Elsevier
Cerebrovascular diseases continue to be one of the leading causes of morbidity and
mortality in humans. Abnormalities in dynamic cerebral autoregulation (dCA) have been …

Multi-scale knowledge transfer vision transformer for 3D vessel shape segmentation

MJ Hua, J Wu, Z Zhong - Computers & Graphics, 2024 - Elsevier
In order to facilitate the robust and precise 3D vessel shape extraction and quantification
from in-vivo Magnetic Resonance Imaging (MRI), this paper presents a novel multi-scale …

A dataset of rodent cerebrovasculature from in vivo multiphoton fluorescence microscopy imaging

C Poon, P Teikari, MF Rachmadi, H Skibbe, K Hynynen - Scientific Data, 2023 - nature.com
We present MiniVess, the first annotated dataset of rodent cerebrovasculature, acquired
using two-photon fluorescence microscopy. MiniVess consists of 70 3D image volumes with …

Simulation of image-guided microwave ablation therapy using a digital twin computational model

F Servin, JA Collins, JS Heiselman… - IEEE Open Journal …, 2023 - ieeexplore.ieee.org
Emerging computational tools such as healthcare digital twin modeling are enabling the
creation of patient-specific surgical planning, including microwave ablation to treat primary …

Mapping physiological and pathological functions of cortical vasculature through aggregation-induced emission nanoprobes assisted quantitative, in vivo NIR-II …

J Meng, Z Feng, S Qian, C Wang, X Li, L Gao… - Biomaterials …, 2022 - Elsevier
Cerebrovascular disease includes all disorders that affect cerebrovascular and cerebral
circulation. Unfortunately, there is currently a lack of a systematic method to image blood …