Assessment and Comparison of Molecular Subtyping and Characterization Methods for Salmonella

S Tang, RH Orsi, H Luo, C Ge, G Zhang… - Frontiers in …, 2019 - frontiersin.org
The food industry is facing a major transition regarding methods for confirmation,
characterization, and subtyping of Salmonella. Whole-genome sequencing (WGS) is rapidly …

Salmonella source attribution based on microbial subtyping

L Barco, F Barrucci, JE Olsen, A Ricci - International Journal of Food …, 2013 - Elsevier
Source attribution of cases of food-borne disease represents a valuable tool for identifying
and prioritizing effective food-safety interventions. Microbial subtyping is one of the most …

Comparison of typing methods with a new procedure based on sequence characterization for Salmonella serovar prediction

ML Ranieri, C Shi, AI Moreno Switt… - Journal of clinical …, 2013 - Am Soc Microbiol
As the development of molecular serotyping approaches is critical for Salmonella spp.,
which include> 2,600 serovars, we performed an initial evaluation of the ability to identify …

Prevalence, Antimicrobial Resistance, and Relatedness of Salmonella Isolated from Chickens and Pigs on Farms, Abattoirs, and Markets in Sichuan Province, China

S Ma, C Lei, L Kong, W Jiang, B Liu, S Men… - Foodborne …, 2017 - liebertpub.com
This study aims at investigating the distribution, antimicrobial resistance, and genetic
relationship of Salmonella isolated from 18 farms, their downstream abattoirs, and markets …

Antibiotic resistance in Salmonella enterica serovar Typhimurium associates with CRISPR sequence type

M DiMarzio, N Shariat, S Kariyawasam… - Antimicrobial agents …, 2013 - Am Soc Microbiol
Salmonella enterica subsp. enterica serovar Typhimurium is a leading cause of food-borne
salmonellosis in the United States. The number of antibiotic-resistant isolates identified in …

[HTML][HTML] The application of pulsed field gel electrophoresis in clinical studies

EG Parizad, EG Parizad, A Valizadeh - Journal of clinical and …, 2016 - ncbi.nlm.nih.gov
Pulsed-field gel electrophoresis is a method applied in separating large segments of
deoxyribonucleotide using an alternating and cross field. In a uniform magnetic field …

Phenotypic and genotypic characterization of antimicrobial resistance profiles in Salmonella isolated from waterfowl in 2002–2005 and 2018–2020 in Sichuan, China

Y Guan, Y Li, J Li, Z Yang, D Zhu, R Jia, M Liu… - Frontiers in …, 2022 - frontiersin.org
Salmonella enterica is a widespread foodborne pathogen with concerning antimicrobial
resistance (AMR). Waterfowl are a major source of Salmonella transmission, but there are …

[HTML][HTML] Evaluation of real-time nanopore sequencing for Salmonella serotype prediction

F Xu, C Ge, H Luo, S Li, M Wiedmann, X Deng… - Food …, 2020 - Elsevier
The use of whole genome sequencing (WGS) data generated by short-read sequencing
technologies such as the Illumina sequencing platforms has been shown to provide reliable …

Subtype analysis of Salmonella isolated from subclinically infected dairy cattle and dairy farm environments reveals the presence of both human-and bovine …

LD Rodriguez-Rivera, EM Wright, JD Siler, M Elton… - Veterinary …, 2014 - Elsevier
While it is well established that clinically ill livestock represent a reservoir of Salmonella, the
importance of subclinical shedders as sources of human salmonellosis is less well defined …

Plasmid Profile and Pulsed–Field Gel Electrophoresis Analysis of Salmonella enterica Isolates from Humans in Turkey

K Ozdemir, S Acar - PloS one, 2014 - journals.plos.org
This study was conducted for typing Salmonella enterica subspecies enterica strains in
Turkey using pulsed–field gel electrophoresis (PFGE) and plasmid DNA profile analysis …