Understanding interaction patterns within deep-sea microbial communities and their potential applications

MZ Nawaz, R Subin Sasidharan, HA Alghamdi, H Dang - Marine Drugs, 2022 - mdpi.com
Environmental microbes living in communities engage in complex interspecies interactions
that are challenging to decipher. Nevertheless, the interactions provide the basis for shaping …

Homogeneous environmental selection dominates microbial community assembly in the oligotrophic South Pacific Gyre

R Allen, LJ Hoffmann, MJ Larcombe… - Molecular …, 2020 - Wiley Online Library
Oligotrophic subtropical gyres are the largest continuous biomes on Earth and play a key
role in global biogeochemical cycles. Microbial communities govern primary production and …

From the sunlit to the aphotic zone: assembly mechanisms and co-occurrence patterns of protistan-bacterial microbiotas in the Western Pacific Ocean

P Sun, Y Wang, Y Zhang, R Logares, P Cheng, D Xu… - Msystems, 2023 - Am Soc Microbiol
We know little about the assembly processes and association patterns of microbial
communities below the photic zone. In marine pelagic systems, there are insufficient …

Distribution, community composition, and potential metabolic activity of bacterioplankton in an urbanized Mediterranean Sea coastal zone

K Richa, C Balestra, R Piredda, V Benes… - Applied and …, 2017 - Am Soc Microbiol
Bacterioplankton are fundamental components of marine ecosystems and influence the
entire biosphere by contributing to the global biogeochemical cycles of key elements. Yet …

Turnover in life-strategies recapitulates marine microbial succession colonizing model particles

A Pascual-García, J Schwartzman, TN Enke… - Frontiers in …, 2022 - frontiersin.org
Particulate organic matter (POM) in the ocean sustains diverse communities of bacteria that
mediate the remineralization of organic complex matter. However, the variability of these …

Optofluidic single-cell genome amplification of sub-micron bacteria in the ocean subsurface

ZC Landry, K Vergin, C Mannenbach, S Block… - Frontiers in …, 2018 - frontiersin.org
Optofluidic single-cell genome amplification was used to obtain genome sequences from
sub-micron cells collected from the euphotic and mesopelagic zones of the northwestern …

The composition, function and assembly mechanism of epiphytic microbial communities on Gracilariopsis lemaneiformis

X Xie, Z He, X Hu, Q Wang, Y Yang - Journal of Experimental Marine …, 2023 - Elsevier
Gracilariopsis lemaneiformis is effective for bioremediation and important ecologically and
economically in coastal ecosystems. However, little is known about the epiphytic microbes …

Sargasso Sea bacterioplankton community structure and drivers of variance as revealed by DNA metabarcoding analysis

JG Gill, KM Hill-Spanik, KA Whittaker, ML Jones… - PeerJ, 2022 - peerj.com
Marine microbes provide the backbone for pelagic ecosystems by cycling and fixing
nutrients and establishing the base of food webs. Microbial communities are often assumed …

High‐throughput metabarcoding of SAR11 assemblages from the southwest Atlantic shelf and arid Patagonia: richness and associated rank abundance distributions

LR Jones, JM Manrique - Quantitative Biology, 2023 - Wiley Online Library
The SAR11 clade is likely the most abundant microbial lineage on earth. Here, we provide
detailed analyses of the group's richness and AD in poorly studied Southern microbiomes …

[PDF][PDF] Marine microbial community dynamics and responses to ocean acidification

R Allen - 2019 - ourarchive.otago.ac.nz
Marine microbes, including both eukaryotes and prokaryotes, are the basal components of
marine food webs and play a fundamental role in global biogeochemical cycling. Marine …